RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SFTPDP35247 375 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 TIMP3P35625 211 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 FRKP42685 505 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 NKX2-1P43699 371 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 KCNJ1P48048 391 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 STX1BP61266 288 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 SQLEQ14534 574 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 ZNF789Q5FWF6 425 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 XKR6Q5GH73 641 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 ARHGEF16Q5VV41 709 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 FAM166AQ6J272 317 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 SH2D5Q6ZV89 423 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 GPR141Q7Z602 305 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 NR2C2APQ86WQ0 139 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 SNX32Q86XE0 403 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 CREBRFQ8IUR6 639 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 KIRREL3Q8IZU9 778 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 CLYBLQ8N0X4 340 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 C10orf53Q8N6V4 93 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 KBTBD8Q8NFY9 601 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 SUSD6Q92537 303 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 PTP4A1Q93096 173 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 CENPTQ96BT3 561 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 ZNF524Q96C55 264 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 SGF29Q96ES7 293 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 SENP5Q96HI0 755 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 C4orf45Q96LM5 186 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 HNRNPABQ99729 332 aaKnown RBP4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 CCDC3Q9BQI4 270 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 INTS9Q9NV88 658 aaKnown RBP4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 TMEM161AQ9NX61 479 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 FBXL5Q9UKA1 691 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 C2CD2Q9Y426 696 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 R4GN57 208 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 RB1CC1Q8TDY2 1594 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 ILVBLA1L0T0 632 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 LRRD1A4D1F6 860 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 PMS2P5A8MQ11 134 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 IKBKBO14920 756 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 RAD51DO75771 328 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 EML2O95834 649 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 NGFP01138 241 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 ATP6V1B1P15313 513 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 MAGEA11P43364 429 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 IER3P46695 156 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 MYL7Q01449 175 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 GCNT1Q02742 428 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 FOLH1Q04609 750 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 KBTBD12Q3ZCT8 623 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 FUT11Q495W5 492 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 GTDC1Q4AE62 458 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 SLC25A53Q5H9E4 307 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 FAM46CQ5VWP2 391 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 UGT3A1Q6NUS8 523 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 TTC27Q6P3X3 843 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 MARK2Q7KZI7 788 aaKnown RBP4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 MEX3DQ86XN8 651 aaKnown RBP4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 SIAH3Q8IW03 269 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 CCDC60Q8IWA6 550 aaPredicted RBP4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 ZNF843Q8N446 348 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 KLHDC1Q8N7A1 406 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 NIPA2Q8N8Q9 360 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 MSANTD4Q8NCY6 345 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 DBF4BQ8NFT6 615 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 HPSE2Q8WWQ2 592 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 METTL21AQ8WXB1 218 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 DYRK2Q92630 601 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 KLHL5Q96PQ7 755 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 ATG101Q9BSB4 218 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 SHARPINQ9H0F6 387 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 RIMS4Q9H426 269 aaPredicted RBP4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 RNF121Q9H920 327 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 PDRG1Q9NUG6 133 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 OR6C2Q9NZP2 312 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 MTRRQ9UBK8 725 aa4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 PA2G4Q9UQ80 394 aaKnown RBP4.86□□□□□ -1.63
CKS1BP1-201ENST00000555221 NPIPA3F8WFD2 350 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 KRT33AO76009 404 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 DDHD2O94830 711 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 BAG2O95816 211 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 BAG3O95817 575 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 GH1P01241 217 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 ANKRD34CP0C6C1 535 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 C8orf89P0DMQ9 161 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 PIK3R1P27986 724 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 LINC01547P58512 204 aaPredicted RBP4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 RCN2Q14257 317 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 GPR33Q49SQ1 333 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 IQCCQ4KMZ1 466 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 PIGWQ7Z7B1 504 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 ANKRD46Q86W74 232 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 RCOR2Q8IZ40 523 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 AMER3Q8N944 861 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 OR4C3Q8NH37 302 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 CKAP2Q8WWK9 683 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 SNRNP40Q96DI7 357 aaKnown RBP4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 BTBD9Q96Q07 612 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 NDNQ99608 321 aa4.85□□□□□ -1.63
CKS1BP1-201ENST00000555221 CDCA3Q99618 268 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms