RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ZNF460Q14592 562 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 LPCAT4Q643R3 524 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 RGMBQ6NW40 437 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SLC2A7Q6PXP3 512 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ARL14EPQ8N8R7 260 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 GATSQ8NAP1 163 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 IL36AQ9UHA7 158 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 MYOCOSA0A1B0GUC4 107 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TMEM88BA6NKF7 163 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 C11orf98E9PRG8 122 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 H0YJX3 145 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 H7C417 338 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PIP5K1BO14986 540 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 MFSD11O43934 449 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SLITRK3O94933 977 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 GADD45GO95257 159 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 OTX2P32243 289 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 CCDC58Q4VC31 144 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 CNTD1Q8N815 330 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 NLGN4YQ8NFZ3 816 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SLC16A10Q8TF71 515 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 AUTS2Q8WXX7 1259 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 CPT1BQ92523 772 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PCM1Q15154 2024 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 MED14O60244 1454 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TRAV6A0A075B6T7 132 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TCRBV9S1A1TA0A576 114 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TTC24A2A3L6 582 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 WNT10BO00744 389 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ABLIM1O14639 778 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SCO2O43819 266 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 RPLP0P05388 317 aaKnown RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 HTR1AP08908 422 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 GPM6BQ13491 265 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 OR8D2Q9GZM6 311 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 C1orf109Q9NX04 203 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SSTP61278 116 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ARHGAP8P85298 464 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TMPPEQ6ZT21 453 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ELP5Q8TE02 316 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 GIN1Q9NXP7 522 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 CDC14AQ9UNH5 594 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TRIOBPQ9H2D6 2365 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SLC5A3P53794 718 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 INTS6LQ5JSJ4 861 aaKnown RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ANKRD23Q86SG2 305 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 NPAS4Q8IUM7 802 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TOMM5Q8N4H5 51 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 HNRNPLLQ8WVV9 542 aaKnown RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TAMM41Q96BW9 452 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 CIB1Q99828 191 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 AASSQ9UDR5 926 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PRORSD1PA6NEY8 169 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 MEIS2O14770 477 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 STK17BO94768 372 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 SLC51AQ86UW1 340 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 GKN2Q86XP6 184 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 IL22RA1Q8N6P7 574 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 GSTCDQ8NEC7 633 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 MKL1Q969V6 931 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 CYP2S1Q96SQ9 504 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 ASB6Q9NWX5 421 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 NUFIP1Q9UHK0 495 aaKnown RBP6.71□□□□□ -1.33
SYNE2-216ENST00000555002 PCDHGB7Q9Y5F8 929 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 CACNA1GO43497 2377 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 ALKQ9UM73 1620 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 TULP4Q9NRJ4 1543 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 ENTPD6O75354 484 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 TRMUO75648 421 aaKnown RBP6.71□□□□□ -1.33
SYNE2-216ENST00000555002 IFNA5P01569 189 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 C8AP07357 584 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 ADH7P40394 386 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 PPP4CP60510 307 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 PHC1P78364 1004 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 CD83Q01151 205 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 MALLQ13021 153 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 KLHL22Q53GT1 634 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 ESCO2Q56NI9 601 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 HACD2Q6Y1H2 254 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 C12orf43Q96C57 262 aaKnown RBP6.71□□□□□ -1.33
SYNE2-216ENST00000555002 SDSLQ96GA7 329 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 RNF157Q96PX1 679 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 NANSQ9NR45 359 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 ARL8BQ9NVJ2 186 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 A6NL46 340 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 MAGEB17A8MXT2 336 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 LILRB5O75023 590 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 RAD51DO75771 328 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 C8GP07360 202 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 DLDP09622 509 aaKnown RBP6.71□□□□□ -1.33
SYNE2-216ENST00000555002 RAC2P15153 192 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 AMY2BP19961 511 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 TIGD6Q17RP2 521 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 LRRC37A5PQ49AS3 106 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 OR13C3Q8NGS6 347 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 FAM84AQ96KN4 292 aa6.71□□□□□ -1.33
SYNE2-216ENST00000555002 DNAJC5Q9H3Z4 198 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms