RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ZNF7P17097 686 aaPredicted RBP16.83■□□□□ 0.28
SHOX-204ENST00000554971 JUNDP17535 347 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 KELP23276 732 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 CLCN7P51798 805 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 EEFSECP57772 596 aaKnown RBP16.83■□□□□ 0.28
SHOX-204ENST00000554971 SMU1Q2TAY7 513 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 CNPY1Q3B7I2 92 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 LDLRAP1Q5SW96 308 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 INTS11Q5TA45 600 aaKnown RBP16.83■□□□□ 0.28
SHOX-204ENST00000554971 IL27RAQ6UWB1 636 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 TAS2R42Q7RTR8 314 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 KANSL1Q7Z3B3 1105 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 PHACTR4Q8IZ21 702 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 RASGEF1AQ8N9B8 481 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 SIDT2Q8NBJ9 832 aaKnown RBP16.83■□□□□ 0.28
SHOX-204ENST00000554971 EEF1AKMT1Q8WVE0 214 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 LRTOMTQ8WZ04 291 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 LRRC61Q9BV99 259 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 TMEM168Q9H0V1 697 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 UCKL1Q9NWZ5 548 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 IKZF3Q9UKT9 509 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 PCDHA9Q9Y5H5 950 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 RP1P56715 2156 aa16.83■□□□□ 0.28
SHOX-204ENST00000554971 NIPSNAP2O75323 286 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 SMIM18P0DKX4 95 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 MSH3P20585 1137 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 GSTT1P30711 240 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 DYNC1I2Q13409 638 aaKnown RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 TGFBIQ15582 683 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 PYCR3Q53H96 274 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 C11orf96Q7Z7L8 435 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 GALNT4Q8N4A0 578 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 CLDN19Q8N6F1 224 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 SPDYE1Q8NFV5 336 aaPredicted RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 CCL4L1Q8NHW4 92 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 ULK4Q96C45 1275 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 KCNA7Q96RP8 456 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 TRIM4Q9C037 500 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 CLPBQ9H078 707 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 COQ10BQ9H8M1 238 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 CARS2Q9HA77 564 aaKnown RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 ZDHHC3Q9NYG2 299 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 APOBEC3BQ9UH17 382 aaKnown RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 PLEKHM1Q9Y4G2 1056 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 SNX13Q9Y5W8 968 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 PIAS2O75928 621 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 CER1O95813 267 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 S100BP04271 92 aaPredicted RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 PCSK2P16519 638 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 PSMA4P25789 261 aaKnown RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 EPHA8P29322 1005 aaPredicted RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 RGS4P49798 205 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 ATXN3P54252 364 aaPredicted RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 POLE2P56282 527 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 RBBP7Q16576 425 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 BORAQ6PGQ7 559 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 SPNS2Q8IVW8 549 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 CHERPQ8IWX8 916 aaKnown RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 SLC25A45Q8N413 288 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 SAP25Q8TEE9 199 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 COPS8Q99627 209 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 HAUS8Q9BT25 410 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 DNAAF2Q9NVR5 837 aaKnown RBP16.82■□□□□ 0.28
SHOX-204ENST00000554971 GULP1Q9UBP9 304 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 MOSPD1Q9UJG1 213 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 PRSS21Q9Y6M0 314 aa16.82■□□□□ 0.28
SHOX-204ENST00000554971 DHRS12A0PJE2 317 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 OR2AG2A6NM03 316 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 VEGFDO43915 354 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 GIMD1P0DJR0 217 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 GRIA3P42263 894 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 GNPDA1P46926 289 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 POLR2JP52435 117 aaKnown RBP16.81■□□□□ 0.28
SHOX-204ENST00000554971 NR1H2P55055 460 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 C1orf61Q13536 156 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 PRRT3Q5FWE3 981 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 TTC23LQ6PF05 361 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 ZBTB49Q6ZSB9 765 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 DET1Q7L5Y6 550 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 GATAD2AQ86YP4 633 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 DPP10Q8N608 796 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 BEND7Q8N7W2 519 aaPredicted RBP16.81■□□□□ 0.28
SHOX-204ENST00000554971 ZNF548Q8NEK5 533 aaPredicted RBP16.81■□□□□ 0.28
SHOX-204ENST00000554971 PPWD1Q96BP3 646 aaKnown RBP16.81■□□□□ 0.28
SHOX-204ENST00000554971 CNBD2Q96M20 576 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 SLC30A3Q99726 388 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 SLC24A3Q9HC58 644 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 CMTM6Q9NX76 183 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 KLHL42Q9P2K6 505 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 GALPQ9UBC7 116 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 GNPTGQ9UJJ9 305 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 BTRCQ9Y297 605 aa16.81■□□□□ 0.28
SHOX-204ENST00000554971 CCDC154A6NI56 674 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 RASGRP1O95267 797 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 TFAP2AP05549 437 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 DGKAP23743 735 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 AKT1P31749 480 aa16.8■□□□□ 0.28
SHOX-204ENST00000554971 ARRB1P49407 418 aaPredicted RBP16.8■□□□□ 0.28
SHOX-204ENST00000554971 HNRNPKP61978 463 aaKnown RBP eCLIP16.8■□□□□ 0.28
SHOX-204ENST00000554971 CDKL1Q00532 357 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms