RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 DUS2Q9NX74 493 aaKnown RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 PSAT1Q9Y617 370 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 SMSP52788 366 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 TSTQ16762 297 aaKnown RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 KIAA1614Q5VZ46 1190 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF517Q6ZMY9 492 aaPredicted RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 AMZ2Q86W34 360 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 GHDCQ8N2G8 530 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 C1orf52Q8N6N3 182 aaKnown RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 HDAC2Q92769 488 aaKnown RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 TMEM74Q96NL1 305 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 IL4I1Q96RQ9 567 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 UCK2Q9BZX2 261 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 OR2AG1Q9H205 316 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 NOTOA8MTQ0 251 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 PPEF2O14830 753 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 FKTNO75072 461 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 AGR2O95994 175 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 C7P10643 843 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 SEMA3AQ14563 771 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 ZBTB8BQ8NAP8 495 aaPredicted RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 OR14C36Q8NHC7 312 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 FAM110BQ8TC76 370 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 NCSTNQ92542 709 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 HSH2DQ96JZ2 352 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 PREBQ9HCU5 417 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 MRPS30Q9NP92 439 aaKnown RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 MED31Q9Y3C7 131 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 SEPT4O43236 478 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 APOL3O95236 402 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 PROZP22891 400 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 CLCN2P51788 898 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 TMBIM6P55061 237 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 TLR1Q15399 786 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 MEP1AQ16819 746 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 TPGS2Q68CL5 300 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 PRSS55Q6UWB4 352 aaPredicted RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 ZCCHC10Q8TBK6 192 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 SMG7Q92540 1137 aaKnown RBP13.59□□□□□ -0.23
VTI1B-204ENST00000554659 TUBA1CQ9BQE3 449 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 MOCS1Q9NZB8 636 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 MARK1Q9P0L2 795 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 RNF6Q9Y252 685 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 MEMO1Q9Y316 297 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 ALG5Q9Y673 324 aa13.59□□□□□ -0.23
VTI1B-204ENST00000554659 A0A1W2PPW3 197 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 SAP18O00422 153 aaKnown RBP13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ENTPD6O75354 484 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 TBX18O95935 607 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 PTPN2P17706 415 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 CSNK2A2P19784 350 aaPredicted RBP13.58□□□□□ -0.24
VTI1B-204ENST00000554659 GLDCP23378 1020 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ARSFP54793 590 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 CDK6Q00534 326 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 SP2Q02086 613 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 KIAA1161Q6NSJ0 714 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 MARCH9Q86YJ5 346 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 INO80EQ8NBZ0 244 aaPredicted RBP13.58□□□□□ -0.24
VTI1B-204ENST00000554659 LRRC15Q8TF66 581 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 C15orf40Q8WUR7 153 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ISOC1Q96CN7 298 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 MKKSQ9NPJ1 570 aaPredicted RBP13.58□□□□□ -0.24
VTI1B-204ENST00000554659 WNT9AO14904 365 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 OPN1SWP03999 348 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 OR3A3P47888 321 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 OR3A2P47893 321 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 AVPR1BP47901 424 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 VLDLRP98155 873 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 DNASE1L3Q13609 305 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ATP6AP1Q15904 470 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ADGRD2Q7Z7M1 963 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 MARVELD2Q8N4S9 558 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 LRCH3Q96II8 777 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 CTPS2Q9NRF8 586 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 SCML2Q9UQR0 700 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 LRRC72A6NJI9 287 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 LOC730098B7Z3J9 87 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ALPIP09923 528 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 CHRNA6Q15825 494 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF630Q2M218 657 aaPredicted RBP13.58□□□□□ -0.24
VTI1B-204ENST00000554659 SETD6Q8TBK2 473 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 WFIKKN2Q8TEU8 576 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 CMTM7Q96FZ5 175 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 SLC45A3Q96JT2 553 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 TBX5Q99593 518 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 TAPBPLQ9BX59 468 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 CDH7Q9ULB5 785 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 TTC24A2A3L6 582 aaPredicted RBP13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ANKRD66B4E2M5 251 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ITGA10O75578 1167 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 DNAJB5O75953 348 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 RASGRP1O95267 797 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 RB1P06400 928 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 ELNP15502 786 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 SP140Q13342 867 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 SNAP47Q5SQN1 464 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 PLD6Q8N2A8 252 aaKnown RBP13.58□□□□□ -0.24
VTI1B-204ENST00000554659 RGMAQ96B86 450 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 SHISA4Q96DD7 197 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms