RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 RASSF2P50749 326 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 HK2P52789 917 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 ASPHQ12797 758 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 KRT72Q14CN4 511 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 GPR19Q15760 415 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 LINC00303Q3SY05 128 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 MRNIPQ6NTE8 343 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 PWWP2BQ6NUJ5 590 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 CNSTQ6PJW8 725 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 TMEM126BQ8IUX1 230 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 CEP97Q8IW35 865 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 D2HGDHQ8N465 521 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 TMEM151AQ8N4L1 468 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 GPATCH11Q8N954 259 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 OR5AR1Q8NGP9 310 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 OR8K5Q8NH50 307 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 KCTD4Q8WVF5 259 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 ASZ1Q8WWH4 475 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 STARD8Q92502 1023 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 PPM1MQ96MI6 270 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 GPR78Q96P69 363 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 TMEM237Q96Q45 408 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 SORT1Q99523 831 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 LRMDAQ9H2I8 198 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 XKR8Q9H6D3 395 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 ZNF395Q9H8N7 513 aaPredicted RBP12□□□□□ -0.49
SHMT2-214ENST00000554604 IL17BQ9UHF5 180 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 POLG2Q9UHN1 485 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 CROTQ9UKG9 612 aa12□□□□□ -0.49
SHMT2-214ENST00000554604 TDRKHQ9Y2W6 561 aaKnown RBP12□□□□□ -0.49
SHMT2-214ENST00000554604 SLC5A10A0PJK1 596 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 C2orf74A8MZ97 194 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 BTN3A3O00478 584 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 PRMT5O14744 637 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 NKX2-8O15522 239 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 CCDC22O60826 627 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 KATNA1O75449 491 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 NDUFS3O75489 264 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 SNUPNO95149 360 aaKnown RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 WISP3O95389 354 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 TIAF1O95411 115 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 NTRK1P04629 796 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 SBK3P0C264 359 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 T-ENOLP0DO92 83 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 SAT1P21673 171 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 SERPINB3P29508 390 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 SHMT2P34897 504 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 CCR10P46092 362 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 AQP5P55064 265 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 HSPA14Q0VDF9 509 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 CDC20Q12834 499 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 SEMA3AQ14563 771 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 TYSND1Q2T9J0 566 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 RBM20Q5T481 1227 aaKnown RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 LIPMQ5VYY2 423 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 PTRHD1Q6GMV3 140 aaKnown RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 FAM45BPQ6NSW5 357 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 TBC1D1Q86TI0 1168 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 LDB1Q86U70 411 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 TBC1D21Q8IYX1 336 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 EXD3Q8N9H8 876 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 FAM45AQ8TCE6 357 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 STON2Q8WXE9 905 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 SCYL1Q96KG9 808 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 NRTNQ99748 197 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 MRPL57Q9BQC6 102 aaKnown RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 MRPL46Q9H2W6 279 aaKnown RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 POPDC3Q9HBV1 291 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 INTS10Q9NVR2 710 aaKnown RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 MARCH4Q9P2E8 410 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-214ENST00000554604 KCND3Q9UK17 655 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 BTRCQ9Y297 605 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 VWA7Q9Y334 891 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 CCDC88CQ9P219 2028 aa11.99□□□□□ -0.49
SHMT2-214ENST00000554604 PIPSLA2A3N6 862 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 FCHO1O14526 889 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 PFDN6O15212 129 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 CPNE3O75131 537 aaKnown RBP11.98□□□□□ -0.49
SHMT2-214ENST00000554604 LYPLA1O75608 230 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-214ENST00000554604 SCRG1O75711 98 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 HSPA4LO95757 839 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 RPN2P04844 631 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 LTA4HP09960 611 aaKnown RBP11.98□□□□□ -0.49
SHMT2-214ENST00000554604 ST6GAL1P15907 406 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 ACADLP28330 430 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 CCR7P32248 378 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 DLG1Q12959 904 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 NFATC3Q12968 1075 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 TBCCQ15814 346 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 FAM83EQ2M2I3 478 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 ZNF789Q5FWF6 425 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 HECTD2Q5U5R9 776 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 FBXW10Q5XX13 1052 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 SDCCAG8Q86SQ7 713 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-214ENST00000554604 ADGRF3Q8IZF5 1079 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 OR5K2Q8NHB8 316 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 CFAP61Q8NHU2 1237 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 N4BP2L2Q92802 583 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-214ENST00000554604 NXNL1Q96CM4 212 aa11.98□□□□□ -0.49
SHMT2-214ENST00000554604 ZNF501Q96CX3 271 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms