RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 LNPEPQ9UIQ6 1025 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 FBXW2Q9UKT8 454 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 PPM1HQ9ULR3 514 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 SLC6A14Q9UN76 642 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 ENTPD4Q9Y227 616 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 USH1CQ9Y6N9 552 aa2.64□□□□□ -1.99
PRPF39-206ENST00000554429 CACNA1BQ00975 2339 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 LOC390937A0A1W2PQ73 354 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 TRIM49BA6NDI0 452 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ANKRD61A6NGH8 418 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 OR6C70A6NIJ9 312 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 SLC22A31A6NKX4 558 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 C4orf47A7E2U8 309 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 AGPSO00116 658 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 RASGRF2O14827 1237 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 KCNN4O15554 427 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ST8SIA3O43173 380 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 EFSO43281 561 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ARHGEF9O43307 516 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF217O75362 1048 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ACTL6BO94805 426 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 SORBS2O94875 1100 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 HTR3BO95264 441 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 RAB3DO95716 219 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 MBP02144 154 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 HMGN1P05114 100 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 LPLP06858 475 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ABHD2P08910 425 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 AGAP20933 346 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 EPHA8P29322 1005 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 GTF2H1P32780 548 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 AVPR1AP37288 418 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 SLC1A3P43003 542 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 RPS5P46782 204 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 FASLGP48023 281 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 CD97P48960 835 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 KLK7P49862 253 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ARFIP2P53365 341 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 GP2P55259 537 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 UBE2G2P60604 165 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 MYL7Q01449 175 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 RHAGQ02094 409 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 KRTAP1-1Q07627 177 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 STX5Q13190 355 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 CLN3Q13286 438 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 PMS2P3Q13401 168 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 BOP1Q14137 746 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF174Q15697 407 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 SPRED3Q2MJR0 410 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 SOWAHCQ53LP3 525 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 C9orf152Q5JTZ5 239 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 UBAP2Q5T6F2 1119 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 RIPOR1Q6ZS17 1223 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 TMPRSS7Q7RTY8 843 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 KANSL1Q7Z3B3 1105 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 EXOC3L1Q86VI1 746 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 CATSPERDQ86XM0 798 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 KBTBD2Q8IY47 623 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 PRSS58Q8IYP2 241 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ARMC10Q8N2F6 343 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 TTC9BQ8N6N2 239 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF781Q8N8C0 355 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 POMGNT2Q8NAT1 580 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 FNDC5Q8NAU1 212 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 LINC00301Q8NCQ3 95 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ENGASEQ8NFI3 743 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 TSTD1Q8NFU3 115 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 OR7G1Q8NGA0 311 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 OR10Z1Q8NGY1 313 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 RPLP0P6Q8NHW5 317 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 WDR48Q8TAF3 677 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 STK35Q8TDR2 534 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF473Q8WTR7 871 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 RAD54LQ92698 747 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 DPF1Q92782 380 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 RHBDF1Q96CC6 855 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 OMA1Q96E52 524 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 DAZAP1Q96EP5 407 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF479Q96JC4 524 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 CHP1Q99653 195 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 SRSF8Q9BRL6 282 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 EXO5Q9H790 373 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 BATF3Q9NR55 127 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 PNO1Q9NRX1 252 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 PNPLA3Q9NST1 481 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 INTS9Q9NV88 658 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 TMLHEQ9NVH6 421 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 HIF1ANQ9NWT6 349 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 MYO1AQ9UBC5 1043 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 DNPEPQ9ULA0 475 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ATXN7L1Q9ULK2 861 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 CCL26Q9Y258 94 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 SLC27A6Q9Y2P4 619 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 GPR55Q9Y2T6 319 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM131Q92545 1883 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 PTPRZ1P23471 2315 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 MAP1BP46821 2468 aaKnown RBP2.63□□□□□ -1.99
PRPF39-206ENST00000554429 A0A088AWK7 358 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF840PA6NDX5 716 aa2.63□□□□□ -1.99
PRPF39-206ENST00000554429 FAM171A2A8MVW0 826 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms