RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 TEDDM1Q5T9Z0 273 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 FAM69BQ5VUD6 431 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 GARNL3Q5VVW2 1013 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 FBXO42Q6P3S6 717 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 SUSD1Q6UWL2 747 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 COX15Q7KZN9 410 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 PPP1R32Q7Z5V6 425 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 LRRC56Q8IYG6 542 aaPredicted RBP9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 MYO1HQ8N1T3 1032 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 CLEC1AQ8NC01 280 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 BBOF1Q8ND07 529 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 MCOLN3Q8TDD5 553 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 CCDC138Q96M89 665 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 NDNQ99608 321 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 WDR83Q9BRX9 315 aaKnown RBP9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 TRIM51Q9BSJ1 452 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 PCBD2Q9H0N5 130 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 PARVBQ9HBI1 364 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 CCDC177Q9NQR7 707 aaPredicted RBP9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 C5AR2Q9P296 337 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 TAC3Q9UHF0 121 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 CHMP2BQ9UQN3 213 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 FBN2P35556 2912 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 DOPEY1Q5JWR5 2465 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 IGLV3-12A0A075B6K2 115 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 LOC105369274A0A096LPK9 316 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 LOC102723532A0A0G2JNH3 316 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 FAM187AA6NFU0 413 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 VSTM2BA6NLU5 285 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 ENO4A6NNW6 628 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 EFCAB8A8MWE9 144 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 H0YGG7 62 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 AGPSO00116 658 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 PRPF4O43172 522 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 NRP2O60462 931 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 SYF2O95926 243 aaKnown RBP9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 MMP11P24347 488 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 CDKN2DP55273 166 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 SOX8P57073 446 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 IL2P60568 153 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 ARF3P61204 181 aaPredicted RBP9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 YBX1P67809 324 aaKnown RBP9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 SLC9A5Q14940 896 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 COLEC12Q5KU26 742 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 DCAF10Q5QP82 559 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 RBM20Q5T481 1227 aaKnown RBP9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 FAM45BPQ6NSW5 357 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 PAQR3Q6TCH7 311 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 MAATS1Q7Z4T9 603 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 SLC26A11Q86WA9 606 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 PALM2Q8IXS6 379 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 OR4N4Q8N0Y3 316 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 PPFIBP2Q8ND30 876 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 FDCSPQ8NFU4 85 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 FAM45AQ8TCE6 357 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 EEF1AKMT1Q8WVE0 214 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 CFAP36Q96G28 342 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 VPS50Q96JG6 964 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 C10orf90Q96M02 699 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 OR2A5Q96R48 311 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 KRT12Q99456 494 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 SMAD5Q99717 465 aaKnown RBP9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZNF304Q9HCX3 659 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 PPANQ9NQ55 473 aaKnown RBP9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 SEMA3GQ9NS98 782 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 P4HTMQ9NXG6 502 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 GPR83Q9NYM4 423 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 STOX2Q9P2F5 926 aaPredicted RBP9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 CDC14AQ9UNH5 594 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 PDE10AQ9Y233 779 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 ABCA12Q86UK0 2595 aa9.93□□□□□ -0.82
PTCD2P1-201ENST00000554393 SPTAN1Q13813 2472 aaKnown RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 KCNE1BA0A087WTH5 132 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 RNF223E7ERA6 249 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 DPM1O60762 260 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 IPO13O94829 963 aaKnown RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 TSPAN12O95859 305 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 ALPPP05187 535 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 ENO2P09104 434 aaPredicted RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 FDXRP22570 491 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 RPL21P46778 160 aaKnown RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 AP1S2P56377 157 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 TBPL1P62380 186 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 MGAT5Q09328 741 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 PDIA2Q13087 525 aaKnown RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 TSTA3Q13630 321 aaPredicted RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 MYBPC3Q14896 1274 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 THEMIS2Q5TEJ8 643 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 VWA5B1Q5TIE3 1220 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 HECTD2Q5U5R9 776 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 PRAMEF13Q5VWM6 474 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 TRMT10BQ6PF06 316 aaKnown RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 ARHGEF39Q8N4T4 335 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 CSNK1A1LQ8N752 337 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 SPATA4Q8NEY3 305 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 ANKRD7Q92527 254 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 RERGQ96A58 199 aaPredicted RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 LINGO1Q96FE5 620 aa9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 PDLIM5Q96HC4 596 aaKnown RBP9.92□□□□□ -0.82
PTCD2P1-201ENST00000554393 CABS1Q96KC9 395 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms