RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 CREG1O75629 220 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 SLU7O95391 586 aaKnown RBP13.18□□□□□ -0.3
NUMB-209ENST00000554315 C2P06681 752 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 SLC35E2BP0CK96 405 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 TNFRSF8P28908 595 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 ARF3P61204 181 aaPredicted RBP13.18□□□□□ -0.3
NUMB-209ENST00000554315 YBX1P67809 324 aaKnown RBP13.18□□□□□ -0.3
NUMB-209ENST00000554315 SRSF6Q13247 344 aaKnown RBP13.18□□□□□ -0.3
NUMB-209ENST00000554315 MUM1Q2TAK8 710 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 PTCHD3Q3KNS1 767 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 GARNL3Q5VVW2 1013 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 TTLL10Q6ZVT0 673 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 SYVN1Q86TM6 617 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 THOC6Q86W42 341 aaKnown RBP13.18□□□□□ -0.3
NUMB-209ENST00000554315 SPATA6LQ8N4H0 392 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 ABHD11Q8NFV4 315 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 STARD8Q92502 1023 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 PYCR2Q96C36 320 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 CRELD1Q96HD1 420 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 OR2A5Q96R48 311 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 UBL7Q96S82 380 aaPredicted RBP13.18□□□□□ -0.3
NUMB-209ENST00000554315 PAFAH2Q99487 392 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 AKIRIN1Q9H9L7 192 aaPredicted RBP13.18□□□□□ -0.3
NUMB-209ENST00000554315 SNX15Q9NRS6 342 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 CUTCQ9NTM9 273 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 CD274Q9NZQ7 290 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 IFT80Q9P2H3 777 aaPredicted RBP13.18□□□□□ -0.3
NUMB-209ENST00000554315 NDOR1Q9UHB4 597 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 IL17BQ9UHF5 180 aa13.18□□□□□ -0.3
NUMB-209ENST00000554315 KMT2BQ9UMN6 2715 aaPredicted RBP13.18□□□□□ -0.3
NUMB-209ENST00000554315 LOC105369274A0A096LPK9 316 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 LOC102723532A0A0G2JNH3 316 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 A0A1B0GX78 115 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 ERVH48-1M5A8F1 160 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 TERTO14746 1132 aaKnown RBP13.17□□□□□ -0.3
NUMB-209ENST00000554315 DSCR3O14972 297 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 IPO13O94829 963 aaKnown RBP13.17□□□□□ -0.3
NUMB-209ENST00000554315 SNRPAP09012 282 aaKnown RBP13.17□□□□□ -0.3
NUMB-209ENST00000554315 ACAP2Q15057 778 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 NDUFA9Q16795 377 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 NKAIN1Q4KMZ8 207 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 MLIPQ5VWP3 458 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 FRMPD2BQ6IN97 320 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 PRMT9Q6P2P2 845 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 CMC1Q7Z7K0 106 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 ISCA2Q86U28 154 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 OR4N4Q8N0Y3 316 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 RHEBL1Q8TAI7 183 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 RHBDF1Q96CC6 855 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 RNF31Q96EP0 1072 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 TSNARE1Q96NA8 513 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 GBP5Q96PP8 586 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 FETUBQ9UGM5 382 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 IKZF3Q9UKT9 509 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 SLC22A14Q9Y267 594 aa13.17□□□□□ -0.3
NUMB-209ENST00000554315 A0A096LPK6 155 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 NKX2-8O15522 239 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.37e-9■■■□□ 14.9
NUMB-209ENST00000554315 KLHL2O95198 593 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 ONECUT2O95948 504 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 ALBP02768 609 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 FAM153BP0C7A2 387 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 COL6A2P12110 1019 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 GNAZP19086 355 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 TFEBP19484 476 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 WT1P19544 449 aaPredicted RBP13.16□□□□□ -0.3
NUMB-209ENST00000554315 F8A1P23610 371 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 CXCR2P25025 360 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 GGT5P36269 586 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 CSNK1G2P78368 415 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 BMPR2Q13873 1038 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 SLC29A2Q14542 456 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 FAM153CQ494X1 144 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 C1orf189Q5VU69 101 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 C16orf46Q6P387 395 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 CSNK1A1LQ8N752 337 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 CAMKVQ8NCB2 501 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 LRRN4CLQ8ND94 238 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 OR4K1Q8NGD4 311 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 UHMK1Q8TAS1 419 aaKnown RBP13.16□□□□□ -0.3
NUMB-209ENST00000554315 SLC5A11Q8WWX8 675 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 MVB12AQ96EY5 273 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 CABS1Q96KC9 395 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 ARHGAP9Q9BRR9 750 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 ACTL8Q9H568 366 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 STARD5Q9NSY2 213 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 CUEDC1Q9NWM3 386 aaPredicted RBP13.16□□□□□ -0.3
NUMB-209ENST00000554315 DHCR7Q9UBM7 475 aaKnown RBP13.16□□□□□ -0.3
NUMB-209ENST00000554315 HMX2A2RU54 273 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 STK16O75716 305 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 CTSBP07858 339 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 SFTPCP11686 197 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 CDH1P12830 882 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 ERV3-1Q14264 604 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 PRTGQ2VWP7 1150 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 ZNF385CQ66K41 422 aaPredicted RBP13.16□□□□□ -0.3
NUMB-209ENST00000554315 KLHDC8AQ8IYD2 350 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 THAP4Q8WY91 577 aa13.16□□□□□ -0.3
NUMB-209ENST00000554315 NXNL1Q96CM4 212 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms