RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ZNF81P51508 661 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 CLCN3P51790 818 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 ARFIP1P53367 373 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 FGL1Q08830 312 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 C2orf80Q0P641 193 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 AP5B1Q2VPB7 878 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 NHLRC3Q5JS37 347 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 MLIPQ5VWP3 458 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 ARHGAP17Q68EM7 881 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 MZT2BQ6NZ67 158 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 XRRA1Q6P2D8 792 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 ERICH5Q6P6B1 374 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 SUSD1Q6UWL2 747 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 TAS1R3Q7RTX0 852 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 KIAA0907Q7Z7F0 614 aaPredicted RBP9.27□□□□□ -0.92
SIX4-202ENST00000554079 ADGRD2Q7Z7M1 963 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 PAQR7Q86WK9 346 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 DNAJC22Q8N4W6 341 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 OR11H7Q8NGC8 314 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 OR5B17Q8NGF7 314 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 OR2T4Q8NH00 348 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 SLC13A3Q8WWT9 602 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 GGHQ92820 318 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 HGDQ93099 445 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 TRMT2BQ96GJ1 504 aaKnown RBP9.27□□□□□ -0.92
SIX4-202ENST00000554079 CXorf58Q96LI9 332 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 COL21A1Q96P44 957 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 OR5M11Q96RB7 305 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 ADPGKQ9BRR6 497 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 TRMOQ9BU70 441 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 NIFKQ9BYG3 293 aaKnown RBP9.27□□□□□ -0.92
SIX4-202ENST00000554079 KMT5AQ9NQR1 393 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 BIN3Q9NQY0 253 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 PDLIM7Q9NR12 457 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 RGS18Q9NS28 235 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 PPP1R14DQ9NXH3 145 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 HECAQ9UBI9 543 aaPredicted RBP9.27□□□□□ -0.92
SIX4-202ENST00000554079 LIMD1Q9UGP4 676 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 ASB4Q9Y574 426 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 DNAJC15Q9Y5T4 150 aa9.27□□□□□ -0.92
SIX4-202ENST00000554079 SHROOM3Q8TF72 1996 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 ALPK3Q96L96 1907 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 DOCK1Q14185 1865 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 ANKRD31Q8N7Z5 1873 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 TRBV23-1A0A0A0MS06 115 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 WASH4PA8MWX3 477 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 HNRNPDLO14979 420 aaKnown RBP9.27□□□□□ -0.93
SIX4-202ENST00000554079 LYPLA2O95372 231 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 NPPAP01160 153 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 IFNA4P05014 189 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 SMIM6P0DI80 62 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 SFTPCP11686 197 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 CTPS1P17812 591 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 TSPAN8P19075 237 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 ICAM3P32942 547 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 MAN2A2P49641 1150 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 PLK1P53350 603 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 NUBP1P53384 320 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 DIO3P55073 304 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 MTPNP58546 118 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 DCDC1P59894 354 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 BTG1P62324 171 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 DOC2BQ14184 412 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 SSX1Q16384 188 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 CDO1Q16878 200 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 ZNF528Q3MIS6 628 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 TIMM50Q3ZCQ8 353 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 KLHL22Q53GT1 634 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 FAM102BQ5T8I3 360 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 KIAA1614Q5VZ46 1190 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 CPZQ66K79 652 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 DLEU7Q6UYE1 221 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 DET1Q7L5Y6 550 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 ZNF367Q7RTV3 350 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 NIM1KQ8IY84 436 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 DPP10Q8N608 796 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 ZNF655Q8N720 491 aaPredicted RBP9.27□□□□□ -0.93
SIX4-202ENST00000554079 ZNF548Q8NEK5 533 aaPredicted RBP9.27□□□□□ -0.93
SIX4-202ENST00000554079 OR52E4Q8NGH9 312 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.27□□□□□ -0.93
SIX4-202ENST00000554079 TWIST2Q8WVJ9 160 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 UCN3Q969E3 161 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 PGAP3Q96FM1 320 aaPredicted RBP9.27□□□□□ -0.93
SIX4-202ENST00000554079 MSLNLQ96KJ4 702 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 ZNF583Q96ND8 569 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 TAPBPLQ9BX59 468 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 FAM126AQ9BYI3 521 aaPredicted RBP9.27□□□□□ -0.93
SIX4-202ENST00000554079 TUBB1Q9H4B7 451 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 MAGIXQ9H6Y5 334 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 FOLH1BQ9HBA9 442 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 ABCB9Q9NP78 766 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 AIG1Q9NVV5 245 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 POLG2Q9UHN1 485 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 SLC6A14Q9UN76 642 aa9.27□□□□□ -0.93
SIX4-202ENST00000554079 COL2A1P02458 1487 aaPredicted RBP9.26□□□□□ -0.93
SIX4-202ENST00000554079 A0A087X1B8 175 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 FAM240BA0A1B0GVZ2 78 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 FAM95CA0A1B0GW59 222 aa9.26□□□□□ -0.93
SIX4-202ENST00000554079 TMEM82A0PJX8 343 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms