RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CAPN5O15484 640 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-210ENST00000553950 TNFSF14O43557 240 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 CPNE6O95741 557 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 CAPN1P07384 714 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 CDK4P11802 303 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 HSD3B1P14060 373 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 TSPAN8P19075 237 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 HSD3B2P26439 372 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 PRDX3P30048 256 aaKnown RBP13.95□□□□□ -0.18
SHMT2-210ENST00000553950 OR1D5P58170 312 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 ERVPABLB-1P60509 514 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 RPS15AP62244 130 aaKnown RBP13.95□□□□□ -0.18
SHMT2-210ENST00000553950 NHLH1Q02575 133 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 DOC2AQ14183 400 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 CES4AQ5XG92 561 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 CYB5D1Q6P9G0 228 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 PRSS42Q7Z5A4 293 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 LRRC34Q8IZ02 419 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 CDYL2Q8N8U2 506 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 OR4K1Q8NGD4 311 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 BAHD1Q8TBE0 780 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-210ENST00000553950 PLCD4Q9BRC7 762 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 DPH7Q9BTV6 452 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 SARGQ9BW04 601 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 CHRNA10Q9GZZ6 450 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 RIC8BQ9NVN3 520 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 PSD3Q9NYI0 1048 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 ADAMTS20P59510 1910 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 OR2A25A4D2G3 310 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 C4orf47A7E2U8 309 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 VPS4BO75351 444 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 FAM107AO95990 144 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 C9P02748 559 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 RPLP0P05388 317 aaKnown RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 ALOX15P16050 662 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 ARRB2P32121 409 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 GRIA3P42263 894 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 CSTF3Q12996 717 aaKnown RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 CPSF6Q16630 551 aaKnown RBP eCLIP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 ZC3H12BQ5HYM0 836 aaKnown RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 CATSPEREQ5SY80 951 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 STPG1Q5TH74 334 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 FRG2Q64ET8 278 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 ZNF425Q6IV72 752 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 TMIGD1Q6UXZ0 262 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 FAM129CQ86XR2 697 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 LAS2Q8IYD9 372 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 ZNF655Q8N720 491 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 GBP7Q8N8V2 638 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 Q8N9G6 341 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 C19orf47Q8N9M1 422 aaKnown RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 FLVCR1-AS1Q8TAF5 88 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 AGR3Q8TD06 166 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 TWIST2Q8WVJ9 160 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 NCSTNQ92542 709 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 CDK15Q96Q40 435 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 FRG2BQ96QU4 278 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 CENPKQ9BS16 269 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 C20orf27Q9GZN8 174 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 ABCG4Q9H172 646 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 LRRN3Q9H3W5 708 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 BRF2Q9HAW0 419 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 PRM3Q9NNZ6 103 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 SLC6A20Q9NP91 592 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 ACSS2Q9NR19 701 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 CUEDC1Q9NWM3 386 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 NMRK1Q9NWW6 199 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 GEMIN8Q9NWZ8 242 aaKnown RBP13.94□□□□□ -0.18
SHMT2-210ENST00000553950 KLHL14Q9P2G3 628 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 ZDHHC2Q9UIJ5 367 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 PPT2Q9UMR5 302 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 PCDHGA1Q9Y5H4 931 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 ASXL3Q9C0F0 2248 aa13.94□□□□□ -0.18
SHMT2-210ENST00000553950 KCNE1BA0A087WTH5 132 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 ULK1O75385 1050 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 RASSF9O75901 435 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 ZBTB11O95625 1053 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-210ENST00000553950 ANKRD34CP0C6C1 535 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 MAGP20916 626 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 TGM1P22735 817 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 AHRP35869 848 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 PIK3CBP42338 1070 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 MLLT3P42568 568 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-210ENST00000553950 CCR10P46092 362 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 ACADVLP49748 655 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 INHBCP55103 352 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 CSNK1G2P78368 415 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 E2F1Q01094 437 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 TRA2AQ13595 282 aaKnown RBP eCLIP13.93□□□□□ -0.18
SHMT2-210ENST00000553950 SPIDRQ14159 915 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 ZRSR2Q15696 482 aaKnown RBP13.93□□□□□ -0.18
SHMT2-210ENST00000553950 AMZ1Q400G9 498 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 PERM1Q5SV97 790 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 KIAA1614Q5VZ46 1190 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 TMEM71Q6P5X7 295 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 RNF44Q7L0R7 432 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 PAQR7Q86WK9 346 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 OR4D9Q8NGE8 314 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 NETO1Q8TDF5 533 aa13.93□□□□□ -0.18
SHMT2-210ENST00000553950 SELENOMQ8WWX9 145 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms