RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 P2RY12Q9H244 342 aa15.5■□□□□ 0.07
ACTN1-209ENST00000553659 C1orf21Q9H246 121 aa15.5■□□□□ 0.07
ACTN1-209ENST00000553659 ALG9Q9H6U8 611 aa15.5■□□□□ 0.07
ACTN1-209ENST00000553659 UCK1Q9HA47 277 aa15.5■□□□□ 0.07
ACTN1-209ENST00000553659 TCF7L2Q9NQB0 619 aa15.5■□□□□ 0.07
ACTN1-209ENST00000553659 PRDM8Q9NQV8 689 aa15.5■□□□□ 0.07
ACTN1-209ENST00000553659 ARL8BQ9NVJ2 186 aa15.5■□□□□ 0.07
ACTN1-209ENST00000553659 KLHL42Q9P2K6 505 aa15.5■□□□□ 0.07
ACTN1-209ENST00000553659 ATXN10Q9UBB4 475 aa15.5■□□□□ 0.07
ACTN1-209ENST00000553659 LILRA5A6NI73 299 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 STX16-NPEPL1H3BU86 382 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 STX16O14662 325 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 GYG2O15488 501 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 PRAMEF1O95521 474 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 C9P02748 559 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 XRCC1P18887 633 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-209ENST00000553659 IL2P60568 153 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 HERVK_113P63132 956 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 UBE2IP63279 158 aaKnown RBP15.49■□□□□ 0.07
ACTN1-209ENST00000553659 IRX1P78414 480 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-209ENST00000553659 SNCBQ16143 134 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 MAVSQ7Z434 540 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 PHYKPLQ8IUZ5 450 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 SPATA6LQ8N4H0 392 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 BIRC8Q96P09 236 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 PLEKHG4BQ96PX9 1271 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 ERVK-6Q9BXR3 956 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 ASB8Q9H765 288 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 BPIFA1Q9NP55 256 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 SIDT1Q9NXL6 827 aaKnown RBP15.49■□□□□ 0.07
ACTN1-209ENST00000553659 CRLS1Q9UJA2 301 aa15.49■□□□□ 0.07
ACTN1-209ENST00000553659 NBASA2RRP1 2371 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 CLEC18AA5D8T8 446 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 GPR89AB7ZAQ6 455 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 CHRNGP07510 517 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 GPR89BP0CG08 455 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 ZNF8P17098 575 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-209ENST00000553659 CHRM3P20309 590 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 RGS4P49798 205 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 TIAL1Q01085 375 aaKnown RBP eCLIP15.48■□□□□ 0.07
ACTN1-209ENST00000553659 FOXM1Q08050 763 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 ZNF678Q5SXM1 525 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 FBXW10Q5XX13 1052 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 PAQR3Q6TCH7 311 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 CLEC18BQ6UXF7 455 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 TMEM26Q6ZUK4 368 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 PIANPQ8IYJ0 282 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 KIF2BQ8N4N8 673 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 TEX9Q8N6V9 391 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 CLEC18CQ8NCF0 446 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 MAGEC3Q8TD91 643 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 ATOH8Q96SQ7 321 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 GPR21Q99679 349 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 ULBP3Q9BZM4 244 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 TRIM39Q9HCM9 518 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 RNF112Q9ULX5 631 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 DHRS7Q9Y394 339 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 PCDHB3Q9Y5E6 796 aa15.48■□□□□ 0.07
ACTN1-209ENST00000553659 COL12A1Q99715 3063 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 PRR19A6NJB7 356 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 AGAP14A8MT82 685 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 EIF3FO00303 357 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-209ENST00000553659 TOX3O15405 576 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-209ENST00000553659 ZBTB14O43829 449 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 UBXN7O94888 489 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 SLC25A14O95258 325 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-209ENST00000553659 VIPP01282 170 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 KRT16P08779 473 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 GFAPP14136 432 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 F8A1P23610 371 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 ACRV1P26436 265 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 DLSTP36957 453 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 GFERP55789 205 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 CDC16Q13042 620 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 IL11RAQ14626 422 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 TTLL9Q3SXZ7 439 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 CTSL3PQ5NE16 218 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 WASHC2DQ5SRD0 308 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 ATP1A1-AS1Q5TC04 95 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 PTRHD1Q6GMV3 140 aaKnown RBP15.47■□□□□ 0.07
ACTN1-209ENST00000553659 C6orf15Q6UXA7 325 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-209ENST00000553659 ADAMTSL2Q86TH1 951 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 CUZD1Q86UP6 607 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 SERPINA9Q86WD7 417 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 CPSF7Q8N684 471 aaKnown RBP15.47■□□□□ 0.07
ACTN1-209ENST00000553659 CFAP61Q8NHU2 1237 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 ACTRT2Q8TDY3 377 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 MCUR1Q96AQ8 359 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 EID2BQ96D98 161 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 MAELQ96JY0 434 aaKnown RBP15.47■□□□□ 0.07
ACTN1-209ENST00000553659 PANX3Q96QZ0 392 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 SPATA16Q9BXB7 569 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 C1QTNF3Q9BXJ4 246 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 OR2AG1Q9H205 316 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 OSGEPL1Q9H4B0 414 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 PFDN4Q9NQP4 134 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 NUDT4Q9NZJ9 180 aa15.47■□□□□ 0.07
ACTN1-209ENST00000553659 SCHIP1Q9P0W5 487 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-209ENST00000553659 NFKBIL1Q9UBC1 381 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-209ENST00000553659 ZDHHC2Q9UIJ5 367 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms