RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PTERQ96BW5 349 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 SNF8Q96H20 258 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 SPNS1Q9H2V7 528 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 ZNF552Q9H707 407 aaPredicted RBP17.36■□□□□ 0.37
SHMT2-206ENST00000553529 GPR83Q9NYM4 423 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 VSTM2BA6NLU5 285 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 CXorf49A8MYA2 514 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-206ENST00000553529 ZBTB14O43829 449 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 JRKO75564 520 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 ENO3P13929 434 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-206ENST00000553529 KLC1Q07866 573 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 NAE1Q13564 534 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 ARHGAP19Q14CB8 494 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 C18orf21Q32NC0 220 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-206ENST00000553529 PRAMEF13Q5VWM6 474 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 SLC6A19Q695T7 634 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 JMJD6Q6NYC1 403 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-206ENST00000553529 MED25Q71SY5 747 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 PARP9Q8IXQ6 854 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 LMNTD2Q8IXW0 634 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 PDIK1LQ8N165 341 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 TMEM102Q8N9M5 508 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-206ENST00000553529 STT3BQ8TCJ2 826 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 C19orf60Q96EN9 201 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 ZNF304Q9HCX3 659 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 UTP6Q9NYH9 597 aaKnown RBP17.35■□□□□ 0.37
SHMT2-206ENST00000553529 KLHL42Q9P2K6 505 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 MRFAP1Q9Y605 127 aa17.35■□□□□ 0.37
SHMT2-206ENST00000553529 NPEPPSL1A6NEC2 478 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 TTLL8A6PVC2 850 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 LCMT2O60294 686 aaKnown RBP17.34■□□□□ 0.37
SHMT2-206ENST00000553529 SRPX2O60687 465 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-206ENST00000553529 TTC4O95801 387 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 GUCA1CO95843 209 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 ONECUT2O95948 504 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 B3GALT4O96024 378 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 CDH1P12830 882 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 BCL6P41182 706 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 AGTRAPQ6RW13 159 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 CEP97Q8IW35 865 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 GALNT16Q8N428 558 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 SPATA6LQ8N4H0 392 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 ANKRD49Q8WVL7 239 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 FKBP10Q96AY3 582 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 MOCOSQ96EN8 888 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 OR4K3Q96R72 315 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 SMAD5Q99717 465 aaKnown RBP17.34■□□□□ 0.37
SHMT2-206ENST00000553529 CCDC177Q9NQR7 707 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-206ENST00000553529 ENAMQ9NRM1 1142 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 TAS2R13Q9NYV9 303 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 GRHL1Q9NZI5 618 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 COMMD10Q9Y6G5 202 aa17.34■□□□□ 0.37
SHMT2-206ENST00000553529 UBR5O95071 2799 aaPredicted RBP17.33■□□□□ 0.36
SHMT2-206ENST00000553529 AGPSO00116 658 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 CDC7O00311 574 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 DNAJB6O75190 326 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 FKBP9O95302 570 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 ZGLP1P0C6A0 271 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 FBLP22087 321 aaKnown RBP17.33■□□□□ 0.36
SHMT2-206ENST00000553529 GNLYP22749 145 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 MMP11P24347 488 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 SSTR1P30872 391 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 ARL4CP56559 192 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 CSNK1G2P78368 415 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 EEF1A2Q05639 463 aaKnown RBP17.33■□□□□ 0.36
SHMT2-206ENST00000553529 PDAP1Q13442 181 aaKnown RBP17.33■□□□□ 0.36
SHMT2-206ENST00000553529 PLEKHN1Q494U1 663 aaPredicted RBP17.33■□□□□ 0.36
SHMT2-206ENST00000553529 UBAP2Q5T6F2 1119 aaKnown RBP17.33■□□□□ 0.36
SHMT2-206ENST00000553529 SYT10Q6XYQ8 523 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 SYDE1Q6ZW31 735 aaPredicted RBP17.33■□□□□ 0.36
SHMT2-206ENST00000553529 ZBED8Q8IZ13 594 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 MYO1HQ8N1T3 1032 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 OR9A4Q8NGU2 314 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 ZCCHC10Q8TBK6 192 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 MMABQ96EY8 250 aaPredicted RBP17.33■□□□□ 0.36
SHMT2-206ENST00000553529 YIPF2Q9BWQ6 316 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 SLC26A1Q9H2B4 701 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 CAB39LQ9H9S4 337 aa17.33■□□□□ 0.36
SHMT2-206ENST00000553529 SHANK1Q9Y566 2161 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 SCN3AQ9NY46 2000 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 E7ESA3 106 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 CCDC188H7C350 402 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 PEX12O00623 359 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 RNF224P0DH78 156 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 ITGA3P26006 1051 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 PAFAH1B1P43034 410 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 ST13P50502 369 aaKnown RBP17.32■□□□□ 0.36
SHMT2-206ENST00000553529 RRADP55042 308 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 FBXO48Q5FWF7 155 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 STRA8Q7Z7C7 330 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 ZC3HC1Q86WB0 502 aaKnown RBP17.32■□□□□ 0.36
SHMT2-206ENST00000553529 KCT2Q8NC54 265 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 ZNF740Q8NDX6 193 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 SPATA4Q8NEY3 305 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 OR11G2Q8NGC1 345 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 CPT1CQ8TCG5 803 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 C17orf62Q9BQA9 187 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 CRB3Q9BUF7 120 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 WDR54Q9H977 334 aa17.32■□□□□ 0.36
SHMT2-206ENST00000553529 PARVBQ9HBI1 364 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms