RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 NHSL1Q5SYE7 1610 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 WLSQ5T9L3 541 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 MFSD12Q6NUT3 480 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 FIP1L1Q6UN15 594 aaKnown RBP5.61□□□□□ -1.51
PCNX1-205ENST00000553508 METTL7BQ6UX53 244 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 NUP54Q7Z3B4 507 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 PIGBQ92521 554 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 ZNF486Q96H40 463 aaPredicted RBP5.61□□□□□ -1.51
PCNX1-205ENST00000553508 DGAT2Q96PD7 388 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 RBM4BQ9BQ04 359 aaKnown RBP5.61□□□□□ -1.51
PCNX1-205ENST00000553508 APOL6Q9BWW8 343 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 SPHK2Q9NRA0 654 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 DDX25Q9UHL0 483 aaKnown RBP5.61□□□□□ -1.51
PCNX1-205ENST00000553508 RNF150Q9ULK6 438 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 ABT1Q9ULW3 272 aaKnown RBP5.61□□□□□ -1.51
PCNX1-205ENST00000553508 NRXN3Q9Y4C0 1643 aa5.61□□□□□ -1.51
PCNX1-205ENST00000553508 PCNX3Q9H6A9 2034 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 CLTCL1P53675 1640 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 NEXMIFQ5QGS0 1516 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 HFM1A2PYH4 1435 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 PTPRUQ92729 1446 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 AFF2P51816 1311 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 RPGRIP1LQ68CZ1 1315 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 NEMP2A6NFY4 417 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 TRUB2O95900 331 aaKnown RBP5.6□□□□□ -1.51
PCNX1-205ENST00000553508 ABCB1P08183 1280 aaPredicted RBP5.6□□□□□ -1.51
PCNX1-205ENST00000553508 ZSCAN5DPP0CG00 497 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 ZNF10P21506 573 aaPredicted RBP5.6□□□□□ -1.51
PCNX1-205ENST00000553508 LHCGRP22888 699 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 NNMTP40261 264 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 MTHFRP42898 656 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 PRKG2Q13237 762 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 CTU2Q2VPK5 515 aaKnown RBP5.6□□□□□ -1.51
PCNX1-205ENST00000553508 Q6ZRP5 223 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 MMD2Q8IY49 270 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 TSPAN14Q8NG11 270 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 OR10G8Q8NGN5 311 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 USP28Q96RU2 1077 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 PKP2Q99959 881 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 CCDC3Q9BQI4 270 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 UPF3AQ9H1J1 476 aaKnown RBP5.6□□□□□ -1.51
PCNX1-205ENST00000553508 OLAHQ9NV23 265 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 PRMT7Q9NVM4 692 aaPredicted RBP5.6□□□□□ -1.51
PCNX1-205ENST00000553508 TRIM17Q9Y577 477 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 SMAD5-AS1Q9Y6J3 95 aa5.6□□□□□ -1.51
PCNX1-205ENST00000553508 MYH14Q7Z406 1995 aaKnown RBP5.6□□□□□ -1.51
PCNX1-205ENST00000553508 METP08581 1390 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 PNPLA6Q8IY17 1366 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 STARD3NLO95772 234 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 IGHV2-70P01814 119 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 LINGO3P0C6S8 592 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 TRIM49P0CI25 452 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 TRIM49CP0CI26 452 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 TNIP1Q15025 636 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 SLC35D3Q5M8T2 416 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 SLC25A47Q6Q0C1 308 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 LRRTM1Q86UE6 522 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 LGI2Q8N0V4 545 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 BMPERQ8N8U9 685 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 ZNF519Q8TB69 540 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 C10orf90Q96M02 699 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 EGFL8Q99944 293 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 PYGO2Q9BRQ0 406 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 MAN2C1Q9NTJ4 1040 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 NALCNQ8IZF0 1738 aa5.59□□□□□ -1.51
PCNX1-205ENST00000553508 NAIPQ13075 1403 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 RRBP1Q9P2E9 1410 aaKnown RBP5.58□□□□□ -1.52
PCNX1-205ENST00000553508 LRPPRCP42704 1394 aaKnown RBP5.58□□□□□ -1.52
PCNX1-205ENST00000553508 GLRA3O75311 464 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 ERAL1O75616 437 aaKnown RBP5.58□□□□□ -1.52
PCNX1-205ENST00000553508 CDK2AP2O75956 126 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 IRX6P78412 446 aaPredicted RBP5.58□□□□□ -1.52
PCNX1-205ENST00000553508 VEZF1Q14119 521 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 IL11RAQ14626 422 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 LETM2Q2VYF4 491 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 MCMDC2Q4G0Z9 681 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 G2E3Q7L622 706 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 CAMKMTQ7Z624 323 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 ADGRA1Q86SQ6 560 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 AVL9Q8NBF6 648 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 OR1L3Q8NH93 324 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 ZNRF4Q8WWF5 429 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 PIGQQ9BRB3 760 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 FAM49AQ9H0Q0 323 aaPredicted RBP5.58□□□□□ -1.52
PCNX1-205ENST00000553508 THAP2Q9H0W7 228 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 TRPV4Q9HBA0 871 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 LAMC1P11047 1609 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 CDC42BPGQ6DT37 1551 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 C1orf167Q5SNV9 1468 aa5.58□□□□□ -1.52
PCNX1-205ENST00000553508 CCDC144AA2RUR9 1427 aa5.57□□□□□ -1.52
PCNX1-205ENST00000553508 NPHP3Q7Z494 1330 aa5.57□□□□□ -1.52
PCNX1-205ENST00000553508 SEC24AO95486 1093 aa5.57□□□□□ -1.52
PCNX1-205ENST00000553508 CYP2A7P20853 494 aa5.57□□□□□ -1.52
PCNX1-205ENST00000553508 HNF4AP41235 474 aa5.57□□□□□ -1.52
PCNX1-205ENST00000553508 CASP2P42575 452 aa5.57□□□□□ -1.52
PCNX1-205ENST00000553508 LMO4P61968 165 aa5.57□□□□□ -1.52
PCNX1-205ENST00000553508 IFI35P80217 286 aaPredicted RBP5.57□□□□□ -1.52
PCNX1-205ENST00000553508 SNAI3Q3KNW1 292 aa5.57□□□□□ -1.52
PCNX1-205ENST00000553508 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
PCNX1-205ENST00000553508 GARNL3Q5VVW2 1013 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms