RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 MED27Q6P2C8 311 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 GALNT18Q6P9A2 607 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 SCIMPQ6UWF3 145 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 LCTLQ6UWM7 567 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 C11orf96Q7Z7L8 435 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 SPATA24Q86W54 205 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 HEATR4Q86WZ0 1026 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 ZNF547Q8IVP9 402 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 LAS2Q8IYD9 372 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 TBC1D21Q8IYX1 336 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 NATD1Q8N6N6 113 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 DCBLD1Q8N8Z6 715 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 SMRP1Q8NCR6 262 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 OR2T34Q8NGX1 318 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 WDR20Q8TBZ3 569 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 NRG4Q8WWG1 115 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 PYDC1Q8WXC3 89 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 TMEM125Q96AQ2 219 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 ITCHQ96J02 903 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 SLC45A3Q96JT2 553 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 CCDC115Q96NT0 180 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 NR1H4Q96RI1 486 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 PRPF18Q99633 342 aaKnown RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 C1orf50Q9BV19 199 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 ACPTQ9BZG2 426 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 KCNH6Q9H252 994 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 OR52A5Q9H2C5 316 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 ACTL8Q9H568 366 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 YY1AP1Q9H869 796 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 CCDC177Q9NQR7 707 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 GULP1Q9UBP9 304 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 MAN2B2Q9Y2E5 1009 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 POLR3HQ9Y535 204 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 AP4S1Q9Y587 144 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 SNX13Q9Y5W8 968 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 AP1M2Q9Y6Q5 423 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 HELZP42694 1942 aaKnown RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 MYLKQ15746 1914 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 A0A096LPI6 279 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ASPDHA6ND91 283 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 TMEM202A6NGA9 273 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 IGLON5A6NGN9 336 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 K7ESM1 405 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 RFXAPO00287 272 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 CACNB4O00305 520 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 NME4O00746 187 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 RNASEH2AO75792 299 aaKnown RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 PGRP06401 933 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 SLC35G4P0C7Q5 338 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 C1GALT1C1LP0DN25 315 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 CD1EP15812 388 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 AMD1P17707 334 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ITPKAP23677 461 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 GSTM2P28161 218 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 S100A3P33764 101 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 NUDT1P36639 197 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 PREPP48147 710 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 TRPC1P48995 793 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 METAP1P53582 386 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 NME5P56597 212 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 MS4A2Q01362 244 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 HMGCS1Q01581 520 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 PLAURQ03405 335 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 TAP2Q03519 686 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 KLC1Q07866 573 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 MTAPQ13126 283 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 DOC2AQ14183 400 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ADGRE1Q14246 886 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 TRIP10Q15642 601 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 CYP2A13Q16696 494 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ZXDCQ2QGD7 858 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 TIGD2Q4W5G0 525 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 PAGE3Q5JUK9 113 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 EOGTQ5NDL2 527 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 C6orf10Q5SRN2 563 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 LRIF1Q5T3J3 769 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ANXA8L1Q5VT79 327 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 NANOGP8Q6NSW7 305 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 DLEU7Q6UYE1 221 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 MBOAT1Q6ZNC8 495 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 CAMKMTQ7Z624 323 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 HORMAD1Q86X24 394 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 PDSS2Q86YH6 399 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 RIMKLAQ8IXN7 391 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 SYTL1Q8IYJ3 562 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 KRT78Q8N1N4 520 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 LIX1Q8N485 282 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 PACRGLQ8N7B6 248 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 TP53I13Q8NBR0 393 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ICA1LQ8NDH6 482 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 VPS37AQ8NEZ2 397 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 OR8J2Q8NGG1 315 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 OR5K2Q8NHB8 316 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 NAT14Q8WUY8 206 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ZNF480Q8WV37 535 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 SLC5A11Q8WWX8 675 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 TFGQ92734 400 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 C11orf24Q96F05 449 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 MED8Q96G25 268 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms