RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 PACS2Q86VP3 889 aa18.83■□□□□ 0.61
RBFOX1-215ENST00000553186 DEFB119Q8N690 84 aa18.83■□□□□ 0.61
RBFOX1-215ENST00000553186 CADM4Q8NFZ8 388 aa18.83■□□□□ 0.61
RBFOX1-215ENST00000553186 GPBAR1Q8TDU6 330 aa18.83■□□□□ 0.61
RBFOX1-215ENST00000553186 GPATCH1Q9BRR8 931 aaKnown RBP18.83■□□□□ 0.61
RBFOX1-215ENST00000553186 CUEDC1Q9NWM3 386 aaPredicted RBP18.83■□□□□ 0.61
RBFOX1-215ENST00000553186 PACSIN3Q9UKS6 424 aa18.83■□□□□ 0.61
RBFOX1-215ENST00000553186 TSC22D4Q9Y3Q8 395 aa18.83■□□□□ 0.61
RBFOX1-215ENST00000553186 CIB2O75838 187 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 F3P13726 295 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 SDC1P18827 310 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 TACR1P25103 407 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 CD27P26842 260 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 CEACAM7Q14002 265 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 TRMT5Q32P41 509 aaKnown RBP18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 TIGD2Q4W5G0 525 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 PAGE3Q5JUK9 113 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 NOXRED1Q6NXP6 359 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 RIPOR1Q6ZS17 1223 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 OR2A1Q8NGT9 310 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 METTL2AQ96IZ6 378 aaKnown RBP18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 SLC39A3Q9BRY0 314 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 PCED1AQ9H1Q7 454 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 CROTQ9UKG9 612 aa18.83■□□□□ 0.6
RBFOX1-215ENST00000553186 DYTNA2CJ06 578 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 K7ESF4 209 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 PRICKLE3O43900 615 aaPredicted RBP18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 PRPS2P11908 318 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 SLC19A1P41440 591 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 ACTR3P61158 418 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 RPS13P62277 151 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 ILF3Q12906 894 aaKnown RBP eCLIP18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 HIST2H2ACQ16777 129 aaPredicted RBP18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 ZNF423Q2M1K9 1284 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 ZNF542PQ5EBM4 170 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 C1orf146Q5VVC0 180 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 HIST2H2AA3Q6FI13 130 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 TMIGD1Q6UXZ0 262 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 KRTCAP2Q8N6L1 136 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 OR4K1Q8NGD4 311 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 FAM174AQ8TBP5 190 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 CCDC124Q96CT7 223 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 KLHDC7BQ96G42 594 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 DPY30Q9C005 99 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 PELI2Q9HAT8 420 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 DMRT3Q9NQL9 472 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 AASDHPPTQ9NRN7 309 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 POMPQ9Y244 141 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 LRP4O75096 1905 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 NDUFS1P28331 727 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 HNRNPH1P31943 449 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 CLDN8P56748 225 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 PRDX1Q06830 199 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 GLB1L3Q8NCI6 653 aaPredicted RBP18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 CLHC1Q8NHS4 586 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 SERPINI1Q99574 410 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 CLMPQ9H6B4 373 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 CD320Q9NPF0 282 aa18.82■□□□□ 0.6
RBFOX1-215ENST00000553186 MAPK1P28482 360 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 PIK3CBP42338 1070 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 CXCL12P48061 93 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 DGKQP52824 942 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 SNCBQ16143 134 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 ICE2Q659A1 982 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 VN1R5Q7Z5H4 357 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 PHACTR4Q8IZ21 702 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 CHTF18Q8WVB6 975 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 UBE2E3Q969T4 207 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 SPAG4Q9NPE6 437 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 LEF1Q9UJU2 399 aaPredicted RBP18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 IGKV1-8A0A0C4DH67 115 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 H7BY64 318 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 WNT1P04628 370 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 CELA2BP08218 269 aaPredicted RBP18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 CCR8P51685 355 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 IYDQ6PHW0 289 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 KRT78Q8N1N4 520 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 MINDY1Q8N5J2 469 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 LRRC58Q96CX6 371 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 EGLN2Q96KS0 407 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 PRAP1Q96NZ9 151 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 TSSK3Q96PN8 268 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 TMEM181Q9P2C4 612 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 PCDHB11Q9Y5F2 797 aa18.81■□□□□ 0.6
RBFOX1-215ENST00000553186 GON4LQ3T8J9 2241 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 A0A1W2PR77 199 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 SH3BGRLO75368 114 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 PCSK2P16519 638 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 MAOBP27338 520 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 PEBP1P30086 187 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 RAE1P78406 368 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 RPL6Q02878 288 aaKnown RBP18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 ACSM2AQ08AH3 577 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 ACSM2BQ68CK6 577 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 PARGQ86W56 976 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 RIMKLAQ8IXN7 391 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 DPP10Q8N608 796 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 RNF148Q8N7C7 305 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 MFSD2AQ8NA29 543 aa18.8■□□□□ 0.6
RBFOX1-215ENST00000553186 JPH3Q8WXH2 748 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms