RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ANKRD66B4E2M5 251 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 DDX39AO00148 427 aaKnown RBP5.06□□□□□ -1.6
CPSF6-206ENST00000550987 AP5Z1O43299 807 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 BUD23O43709 281 aaKnown RBP5.06□□□□□ -1.6
CPSF6-206ENST00000550987 GPR137BO60478 399 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 CRCPO75575 148 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 RFPL2O75678 378 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 ACSL3O95573 720 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 MT-ND3P03897 115 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 PLA2G4BP0C869 781 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 PSG1P11464 419 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 CYP11B2P19099 503 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 POLR2CP19387 275 aaPredicted RBP5.06□□□□□ -1.6
CPSF6-206ENST00000550987 PTPN3P26045 913 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 WNT5AP41221 380 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 MAPK12P53778 367 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 ABATP80404 500 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 TROAPQ12815 778 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 CALCRLQ16602 461 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 CASC4Q6P4E1 433 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 KLC3Q6P597 504 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 FAM114A1Q8IWE2 563 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 PGBD5Q8N414 524 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 NAT8LQ8N9F0 302 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 PPFIBP2Q8ND30 876 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 RDM1Q8NG50 284 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 OR52I2Q8NH67 350 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 DNASE1L2Q92874 299 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 ATP6V0A1Q93050 837 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 RPL36ALQ969Q0 106 aaKnown RBP5.06□□□□□ -1.6
CPSF6-206ENST00000550987 SNX21Q969T3 373 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 CABS1Q96KC9 395 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 TSPAN18Q96SJ8 248 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 EBF3Q9H4W6 596 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 SLA2Q9H6Q3 261 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 TMEM206Q9H813 350 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 MINDY3Q9H8M7 445 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 MYNNQ9NPC7 610 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 OSER1Q9NX31 292 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 PTGFRNQ9P2B2 879 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 ISY1Q9ULR0 285 aaKnown RBP5.06□□□□□ -1.6
CPSF6-206ENST00000550987 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.06□□□□□ -1.6
CPSF6-206ENST00000550987 PLXNB2O15031 1838 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 TSC2P49815 1807 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 LOC285556D6RIA3 1793 aa5.06□□□□□ -1.6
CPSF6-206ENST00000550987 A0A0U1RQJ8 604 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 A0A1W2PPW3 197 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 A0A1W2PRV1 198 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 OR5K3A6NET4 321 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 ERVV-2B6SEH9 535 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 TMEM178BH3BS89 294 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 SOCS2O14508 198 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 PTGESO14684 152 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 EIF3DO15371 548 aaKnown RBP eCLIP5.05□□□□□ -1.6
CPSF6-206ENST00000550987 PGLSO95336 258 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 CLDN14O95500 239 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 HOXB2P14652 356 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 CCND3P30281 292 aaPredicted RBP5.05□□□□□ -1.6
CPSF6-206ENST00000550987 ABCG1P45844 678 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 KCNJ1P48048 391 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 CSRP3P50461 194 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 STX1BP61266 288 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 C17orf67Q0P5P2 114 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 OASLQ15646 514 aaKnown RBP5.05□□□□□ -1.6
CPSF6-206ENST00000550987 SPOUT1Q5T280 376 aaKnown RBP5.05□□□□□ -1.6
CPSF6-206ENST00000550987 FAM69BQ5VUD6 431 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 ALKBH5Q6P6C2 394 aaKnown RBP5.05□□□□□ -1.6
CPSF6-206ENST00000550987 ATG9AQ7Z3C6 839 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 PHLDB2Q86SQ0 1253 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 APOBEC3FQ8IUX4 373 aaKnown RBP5.05□□□□□ -1.6
CPSF6-206ENST00000550987 CLYBLQ8N0X4 340 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 PSMA8Q8TAA3 256 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 TANKQ92844 425 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 DAZLQ92904 295 aaKnown RBP5.05□□□□□ -1.6
CPSF6-206ENST00000550987 MUS81Q96NY9 551 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 MRIQ9BWK5 157 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 SLC5A7Q9GZV3 580 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 MTIF3Q9H2K0 278 aaKnown RBP5.05□□□□□ -1.6
CPSF6-206ENST00000550987 SNX25Q9H3E2 840 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 KLHL1Q9NR64 748 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 CACNG4Q9UBN1 327 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 ATP6V0A2Q9Y487 856 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 A0A1B0GUL6 1792 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 CCDC168Q8NDH2 2452 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 NOTCH1P46531 2555 aa5.05□□□□□ -1.6
CPSF6-206ENST00000550987 A0A1W2PP11 408 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 A0A1W2PPQ1 181 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 HYKKA2RU49 373 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 LOC730098B7Z3J9 87 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 PDHXO00330 501 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 MBTPS2O43462 519 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 LDLRP01130 860 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 SLPIP03973 132 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 PRSS2P07478 247 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 SNRNP70P08621 437 aaKnown RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 HMOX1P09601 288 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 IGHV4-30-4P0DP06 118 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 SAGP10523 405 aaPredicted RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 TGFB3P10600 412 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 P4HA1P13674 534 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms