RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 CAND1Q86VP6 1230 aaKnown RBP8.62□□□□□ -1.03
LETMD1-228ENST00000550929 LURAP1LQ8IV03 231 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 PLD3Q8IV08 490 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 DENND6AQ8IWF6 608 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 OR11G2Q8NGC1 345 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 MAGEC3Q8TD91 643 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 SMPDL3AQ92484 453 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 ZNF669Q96BR6 464 aaPredicted RBP8.62□□□□□ -1.03
LETMD1-228ENST00000550929 MS4A14Q96JA4 679 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 CABS1Q96KC9 395 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 C10orf90Q96M02 699 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 AGAP4Q96P64 663 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 ZFYVE21Q9BQ24 234 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 WDR77Q9BQA1 342 aaPredicted RBP8.62□□□□□ -1.03
LETMD1-228ENST00000550929 SLC26A1Q9H2B4 701 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 WDR54Q9H977 334 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 MRM3Q9HC36 420 aaKnown RBP8.62□□□□□ -1.03
LETMD1-228ENST00000550929 MRPS30Q9NP92 439 aaKnown RBP8.62□□□□□ -1.03
LETMD1-228ENST00000550929 SEMA3GQ9NS98 782 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 CUEDC1Q9NWM3 386 aaPredicted RBP8.62□□□□□ -1.03
LETMD1-228ENST00000550929 ZNF446Q9NWS9 450 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 PLA2G3Q9NZ20 509 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 SPATA7Q9P0W8 599 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 TAC3Q9UHF0 121 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 C3orf18Q9UK00 162 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 MRFAP1Q9Y605 127 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 CCDC88CQ9P219 2028 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 FER1L5A0AVI2 2057 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 MAST4O15021 2626 aa8.62□□□□□ -1.03
LETMD1-228ENST00000550929 IGKV1-8A0A0C4DH67 115 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 H3BMM5 538 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 MAP2K7O14733 419 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 PFDN6O15212 129 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 USP1O94782 785 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 FKBP9O95302 570 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 MATN4O95460 622 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 CLDN1O95832 211 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 F10P00742 488 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 LDLRP01130 860 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 ESR1P03372 595 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 CATP04040 527 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 CELA2AP08217 269 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 CCDC175P0C221 793 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 OGNP20774 298 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 PNLIPRP1P54315 467 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 EMP2P54851 167 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 CDK16Q00536 496 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 EEF1A2Q05639 463 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 CDC16Q13042 620 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 THOC5Q13769 683 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 DHX34Q14147 1143 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 MUM1Q2TAK8 710 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 PRTGQ2VWP7 1150 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 ZNF470Q6ECI4 717 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 KIAA0930Q6ICG6 404 aaPredicted RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 ZNF549Q6P9A3 640 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 ADCK2Q7Z695 626 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 KCNMB4Q86W47 210 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 PAQR7Q86WK9 346 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 CILP2Q8IUL8 1156 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 REXO1L1PQ8IX06 675 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 SHISA5Q8N114 240 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 CSNK1A1LQ8N752 337 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 HMGCLL1Q8TB92 370 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 GRHL3Q8TE85 626 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 MAGOHBQ96A72 148 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 MMABQ96EY8 250 aaPredicted RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 TCF12Q99081 682 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 LHPPQ9H008 270 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 FAM107BQ9H098 131 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 SAMD15Q9P1V8 674 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 PTGFRNQ9P2B2 879 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 TRPC4Q9UBN4 977 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 ZNF282Q9UDV7 671 aaPredicted RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 PCYOX1Q9UHG3 505 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 NXT1Q9UKK6 140 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 RUVBL1Q9Y265 456 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 SLC5A6Q9Y289 635 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 SHANK1Q9Y566 2161 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 PTPN13Q12923 2485 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 A0A0A6YYC8 382 aaPredicted RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 ERICH4A6NGS2 130 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 H0YHG0 523 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 I3L1I5 382 aaPredicted RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 KIF2AO00139 706 aaPredicted RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 HAT1O14929 419 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 KIF5CO60282 957 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 COQ9O75208 318 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 PSIP1O75475 530 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 DDAH2O95865 285 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 SLC16A8O95907 504 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 HPP00738 406 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 HEXBP07686 556 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 ERGP11308 486 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 ACPPP15309 386 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 PAMP19021 973 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 CLCN7P51798 805 aa8.61□□□□□ -1.03
LETMD1-228ENST00000550929 MAT1AQ00266 395 aaKnown RBP8.61□□□□□ -1.03
LETMD1-228ENST00000550929 RNF187Q5TA31 235 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms