RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SPDYCQ5MJ68 293 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 CYP4A22Q5TCH4 519 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 ENPP7Q6UWV6 458 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 MFSD6Q6ZSS7 791 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 SMIM5Q71RC9 77 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 FOXP4Q8IVH2 680 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-205ENST00000550592 FAM219AQ8IW50 185 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 FAM9BQ8IZU0 186 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 SIX6OS1Q8N1H7 587 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 CIARTQ8N365 385 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-205ENST00000550592 CORO2AQ92828 525 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 STAMBPL1Q96FJ0 436 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 VMP1Q96GC9 406 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 SPATA33Q96N06 139 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 INTS14Q96SY0 518 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 INPP5KQ9BT40 448 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 TFB2MQ9H5Q4 396 aaKnown RBP4.51□□□□□ -1.69
LIMA1-205ENST00000550592 Q9H8V8 135 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 XAB2Q9HCS7 855 aaKnown RBP4.51□□□□□ -1.69
LIMA1-205ENST00000550592 A4GALTQ9NPC4 353 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 COQ3Q9NZJ6 369 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 ZDHHC2Q9UIJ5 367 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 DAPK2Q9UIK4 370 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 ACAD8Q9UKU7 415 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 FAF1Q9UNN5 650 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-205ENST00000550592 CCDC7Q96M83 1385 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 N4BP2Q86UW6 1770 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 YTHDC2Q9H6S0 1430 aaKnown RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 A0A1W2PN81 502 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 DNM1LO00429 736 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 PLOD2O00469 737 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 IFIT3O14879 490 aaKnown RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 XPNPEP2O43895 674 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 PRKRAO75569 313 aaKnown RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 SLU7O95391 586 aaKnown RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 ATP1A1P05023 1023 aaKnown RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 TGFB3P10600 412 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 GNAZP19086 355 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 TCF7P36402 384 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 CHRNA7P36544 502 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 HSD17B3P37058 310 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 MNDAP41218 407 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 GMPSP49915 693 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 GAS1P54826 345 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 B3GALT5-AS1P59052 145 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 KRTAP10-11P60412 298 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 ZNF415Q09FC8 603 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 ARL16Q0P5N6 197 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 ZNF672Q499Z4 452 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 TECRLQ5HYJ1 363 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 SHEQ5VZ18 495 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 MAPKAPK5-AS1Q8N8E1 139 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 OR1J1Q8NGS3 322 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 VANGL1Q8TAA9 524 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 GRAPLQ8TC17 118 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 NSMAFQ92636 917 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 RAD54LQ92698 747 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 THOC1Q96FV9 657 aaKnown RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 CCDC114Q96M63 670 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 PRAM1Q96QH2 718 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 FNBP1Q96RU3 617 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 MLPHQ9BV36 600 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 MIS12Q9H081 205 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 S1PR5Q9H228 398 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 UPF2Q9HAU5 1272 aaKnown RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 ZFP57Q9NU63 452 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 FAM118AQ9NWS6 357 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 DONSONQ9NYP3 566 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 WDR83OSQ9Y284 106 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 ZFP37Q9Y6Q3 630 aaPredicted RBP4.5□□□□□ -1.69
LIMA1-205ENST00000550592 A0A0C4DFX4 3053 aa4.5□□□□□ -1.69
LIMA1-205ENST00000550592 KIF1BO60333 1816 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 ARFGEF1Q9Y6D6 1849 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 PPIP5K1Q6PFW1 1433 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 NSD3Q9BZ95 1437 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 C5orf52A6NGY3 159 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 CASTOR2A6NHX0 329 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 ATP6AP2O75787 350 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 MOCS3O95396 460 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 TGDSO95455 350 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 CRYAAP02489 173 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 NR3C1P04150 777 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 IGHV4-38-2P0DP08 117 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 IRF2P14316 349 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 EFNA1P20827 205 aaPredicted RBP4.49□□□□□ -1.69
LIMA1-205ENST00000550592 JAK1P23458 1154 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 COPB2P35606 906 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 DCTP40126 519 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 CDH11P55287 796 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 ZRSR1Q15695 479 aaKnown RBP4.49□□□□□ -1.69
LIMA1-205ENST00000550592 PKN2Q16513 984 aaKnown RBP4.49□□□□□ -1.69
LIMA1-205ENST00000550592 ODF4Q2M2E3 257 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 DCAF10Q5QP82 559 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 KIAA1161Q6NSJ0 714 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 GDPD4Q6W3E5 623 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 OR11H4Q8NGC9 324 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 GDAP1Q8TB36 358 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 FAM20AQ96MK3 541 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 DESI2Q9BSY9 194 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 GTPBP2Q9BX10 602 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms