RNA–Protein interactions for RNA: ENST00000550290.2

AC048341.2-201, humanhuman

TSL 4 BASIC

Gene AC048341.2, Length 8,693 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048341.2-201ENST00000550290 ZKSCAN5Q9Y2L8 839 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 NAALAD2Q9Y3Q0 740 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 NEUROG3Q9Y4Z2 214 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 LOC101059948A0A1B0GTJ6 334 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 RGSL1A5PLK6 1076 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 FAM90A27PA6NNH2 459 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 ACP1P24666 158 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 IRF9Q00978 393 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 KCNAB2Q13303 367 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 EIF3IQ13347 325 aaKnown RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 PLA2G2CQ5R387 149 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 KDELC1Q6UW63 502 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 RIPOR1Q6ZS17 1223 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 NUDCD3Q8IVD9 361 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 ZNF683Q8IZ20 524 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 OR5M9Q8NGP3 310 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TMEM174Q8WUU8 243 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 SLC9A6Q92581 669 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CCDC138Q96M89 665 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 NOL11Q9H8H0 719 aaKnown RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 IL1RL2Q9HB29 575 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 MKKSQ9NPJ1 570 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 DNAJC11Q9NVH1 559 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 SLC24A2Q9UI40 661 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 OSGIN2Q9Y236 505 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 AREL1O15033 823 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 PEX1O43933 1283 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 RFPL1O75677 317 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TCEA3O75764 348 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CCSMST1Q4G0I0 132 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TRMT10BQ6PF06 316 aaKnown RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TMEM207Q6UWW9 146 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 GATSQ8NAP1 163 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 FRMD8Q9BZ67 464 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 REXO4Q9GZR2 422 aaKnown RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 EHD1Q9H4M9 534 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CUEDC1Q9NWM3 386 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 A0A1W2PR77 199 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 ESR1P03372 595 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 LTA4HP09960 611 aaKnown RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CBSLP0DN79 551 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CCNA2P20248 432 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 SERPINB3P29508 390 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CBSP35520 551 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 GP5P40197 560 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 STX1BP61266 288 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TUBB4BP68371 445 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TUBB2AQ13885 445 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TMEM259Q4ZIN3 620 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 AGTRAPQ6RW13 159 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 NELL1Q92832 810 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TUBB2BQ9BVA1 445 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 PCBD2Q9H0N5 130 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 IL17CQ9P0M4 197 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 SLC17A4Q9Y2C5 497 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 PCDHGB2Q9Y5G2 931 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 SCN3AQ9NY46 2000 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 EME2A4GXA9 379 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 HTRA2O43464 458 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 OPN1LWP04000 364 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TPOP07202 933 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 ITGA2BP08514 1039 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CDH2P19022 906 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CRABP2P29373 138 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CAPZA2P47755 286 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 KCNJ11Q14654 390 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 FAM47EQ6ZV65 393 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 KIAA1958Q8N8K9 716 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 BAHD1Q8TBE0 780 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 STAG3L4Q8TBR4 150 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 MCCC2Q9HCC0 563 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 SELENONQ9NZV5 590 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 DKKL1Q9UK85 242 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 ZNF490Q9ULM2 529 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 A0A087X1B8 175 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 C1orf105O95561 183 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 SNRPAP09012 282 aaKnown RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 AGTR2P50052 363 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 SEMA3AQ14563 771 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 FHL5Q5TD97 284 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 ICA1LQ8NDH6 482 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TMEM131Q92545 1883 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TRAPPC9Q96Q05 1148 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 INTS10Q9NVR2 710 aaKnown RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 PLAAQ9Y263 795 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TIMM22Q9Y584 194 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 PCYT1BQ9Y5K3 369 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 H0YGG7 62 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 WWP2O00308 870 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 RTCAO00442 366 aaKnown RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 AP2A2O94973 939 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 P04436 131 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 TFPIP10646 304 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 CD46P15529 392 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 BUD31P41223 144 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 LIMK2P53671 638 aa5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 ARF3P61204 181 aaPredicted RBP5.35□□□□□ -1.55
AC048341.2-201ENST00000550290 RPS13P62277 151 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms