RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	FFAR3	O14843	346 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	GPR42	O15529	346 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	SNX3	O60493	162 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	VPS4B	O75351	444 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	ULK1	O75385	1050 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	LDOC1	O95751	146 aa	Predicted RBP	11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	CKMT1A	P12532	417 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	ALOX15	P16050	662 aa	Predicted RBP	11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	CDH3	P22223	829 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	GSTM2	P28161	218 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	PEBP1	P30086	187 aa	Known RBP	11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	AQP5	P55064	265 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	E2F2	Q14209	437 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	SLBP	Q14493	270 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	ZRSR2	Q15696	482 aa	Known RBP	11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	FRG2	Q64ET8	278 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	IRGC	Q6NXR0	463 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	ACAD11	Q709F0	780 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	PLXDC1	Q8IUK5	500 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	ANKS4B	Q8N8V4	417 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160		Q8N9G6	341 aa	Predicted RBP	11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	TTL	Q8NG68	377 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	RHBDD1	Q8TEB9	315 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	SELENOM	Q8WWX9	145 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	NCSTN	Q92542	709 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	C19orf60	Q96EN9	201 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	THOC1	Q96FV9	657 aa	Known RBP	11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	FRG2B	Q96QU4	278 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	OR2A14	Q96R47	310 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	KCNA7	Q96RP8	456 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	NRTN	Q99748	197 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	PLCD4	Q9BRC7	762 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	NUF2	Q9BZD4	464 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	TWSG1	Q9GZX9	223 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	RAB33B	Q9H082	229 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	RABEP2	Q9H5N1	569 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	NT5DC2	Q9H857	520 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	FTSJ1	Q9UET6	329 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	EPHA6	Q9UF33	1036 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	DCTN4	Q9UJW0	460 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	ZNF225	Q9UK10	706 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	TIMM22	Q9Y584	194 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	DNAJC15	Q9Y5T4	150 aa		11.18	□□□□□ -0.62
CNOT2-223	ENST00000550160	IGHV1OR21-1	A0A087WYE8	117 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160		A0A1B0GTL3	188 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	TRBC2	A0A5B9	178 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	TLCD2	A6NGC4	264 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	ANKDD1B	A6NHY2	528 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160		H7BY64	318 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	SLC28A1	O00337	649 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	MANBA	O00462	879 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	PIP5K1B	O14986	540 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	RGS14	O43566	566 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	DIAPH2	O60879	1101 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	PCNA	P12004	261 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	HSD3B1	P14060	373 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	EZR	P15311	586 aa	Known RBP	11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	CKMT2	P17540	419 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	HSD3B2	P26439	372 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	VARS	P26640	1264 aa	Known RBP	11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	ARFIP2	P53365	341 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	INHBC	P55103	352 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	FOXA1	P55317	472 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	REEP5	Q00765	189 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	GABPB1	Q06547	395 aa	Predicted RBP	11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	RBBP5	Q15291	538 aa	Known RBP	11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	IMPG1	Q17R60	797 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	PROX2	Q3B8N5	592 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	AMZ1	Q400G9	498 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	KIAA1614	Q5VZ46	1190 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	GUSBP11	Q6P575	273 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	TMIGD1	Q6UXZ0	262 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	ATG14	Q6ZNE5	492 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	DBX2	Q6ZNG2	339 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	PRR23C	Q6ZRP0	262 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	RNF165	Q6ZSG1	346 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	SPRED1	Q7Z699	444 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	FAM129C	Q86XR2	697 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	CACNA2D3	Q8IZS8	1091 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	CARF	Q8N187	725 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	GBP7	Q8N8V2	638 aa	Predicted RBP	11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	ZNF473	Q8WTR7	871 aa	Known RBP	11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	STON2	Q8WXE9	905 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	ZUFSP	Q96AP4	578 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	CNDP2	Q96KP4	475 aa	Known RBP	11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	RILP	Q96NA2	401 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	PRAP1	Q96NZ9	151 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	DPYSL5	Q9BPU6	564 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	TMEM120A	Q9BXJ8	343 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	MEAF6	Q9HAF1	191 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	TNFRSF12A	Q9NP84	129 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	SLC6A20	Q9NP91	592 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	NMRK1	Q9NWW6	199 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	LHX6	Q9UPM6	363 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	SH2B3	Q9UQQ2	575 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	BTRC	Q9Y297	605 aa		11.17	□□□□□ -0.62
CNOT2-223	ENST00000550160	CABIN1	Q9Y6J0	2220 aa		11.17	□□□□□ -0.62

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