RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TMEM207Q6UWW9 146 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 C17orf64Q86WR6 236 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 CTAGE3PQ8IX95 158 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 MMGT1Q8N4V1 131 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 ANKRD7Q92527 254 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 FBXL8Q96CD0 374 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 CABS1Q96KC9 395 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 SGPP1Q9BX95 441 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 FAM129AQ9BZQ8 928 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 ATG10Q9H0Y0 220 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 GPAMQ9HCL2 828 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 ZDHHC18Q9NUE0 388 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 NOVA2Q9UNW9 492 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 HEMK1Q9Y5R4 338 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 PCSK5Q92824 1860 aa16.46■□□□□ 0.22
CHMP1A-208ENST00000550102 CTAGE15A4D2H0 777 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 NPEPPSL1A6NEC2 478 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 ARGFXA6NJG6 315 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 CTAGE8P0CG41 777 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 OTX2P32243 289 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 EMP3P54852 163 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 NAB1Q13506 487 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 PPP1R3AQ16821 1122 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 LACTB2Q53H82 288 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 MRPL14Q6P1L8 145 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 PRMT9Q6P2P2 845 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 FBXO42Q6P3S6 717 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 LCTLQ6UWM7 567 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 CEP128Q6ZU80 1094 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 MRGPREQ86SM8 312 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 ZNF605Q86T29 641 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 ADAMTSL2Q86TH1 951 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 CTAGE6Q86UF2 777 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 CEP97Q8IW35 865 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 CTAGE4Q8IX94 777 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 METTL27Q8N6F8 245 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 NOA1Q8NC60 698 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 KIF18AQ8NI77 898 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 ALKBH8Q96BT7 664 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 C10orf90Q96M02 699 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 IP6K3Q96PC2 410 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 OR2A5Q96R48 311 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 GPR22Q99680 433 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 HAUS8Q9BT25 410 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 WDR54Q9H977 334 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 LRRC4CQ9HCJ2 640 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 SLC22A11Q9NSA0 550 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 TMEM184CQ9NVA4 438 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 NXT1Q9UKK6 140 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 SH2B3Q9UQQ2 575 aa16.45■□□□□ 0.22
CHMP1A-208ENST00000550102 H7BY64 318 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 CDC7O00311 574 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 TXNDC9O14530 226 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 CNOT3O75175 753 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 GUCA1CO95843 209 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 ONECUT2O95948 504 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 C1QAP02745 245 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 ALBP02768 609 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 RRADP55042 308 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 RPS15AP62244 130 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 ATP1A4Q13733 1029 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 USP10Q14694 798 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 KBTBD12Q3ZCT8 623 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 FRA10AC1Q70Z53 315 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 COX15Q7KZN9 410 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 OVCH1Q7RTY7 1134 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 PPM1NQ8N819 430 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 OR56A3Q8NH54 315 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 MVB12AQ96EY5 273 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 ABHD17AQ96GS6 310 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 PRAP1Q96NZ9 151 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 TRIM55Q9BYV6 548 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 ING2Q9H160 280 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 SLC26A1Q9H2B4 701 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 SYNPO2LQ9H987 977 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 ACSS2Q9NR19 701 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 CTSFQ9UBX1 484 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 MTRF1LQ9UGC7 380 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 IKZF3Q9UKT9 509 aa16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 RUVBL1Q9Y265 456 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 MTO1Q9Y2Z2 717 aaKnown RBP16.44■□□□□ 0.22
CHMP1A-208ENST00000550102 PRPF4O43172 522 aaKnown RBP eCLIP16.43■□□□□ 0.225e-7■■■■□ 24.1
CHMP1A-208ENST00000550102 DNAJB5O75953 348 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 MED26O95402 600 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 CDH1P12830 882 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 STMN1P16949 149 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 SPRP35270 261 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 CDKL1Q00532 357 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 CHAF1BQ13112 559 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 SSPNQ14714 243 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 TSNQ15631 228 aaKnown RBP16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 HKDC1Q2TB90 917 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 GARNL3Q5VVW2 1013 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 MED25Q71SY5 747 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 PRICKLE2Q7Z3G6 844 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 PLD3Q8IV08 490 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 DTWD1Q8N5C7 304 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 TMEM102Q8N9M5 508 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 FBF1Q8TES7 1133 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms