RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 MAGEC3Q8TD91 643 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 LPGAT1Q92604 370 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 MOCOSQ96EN8 888 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 MMABQ96EY8 250 aaPredicted RBP14.63□□□□□ -0.07
RAB5C-205ENST00000550013 CCDC120Q96HB5 630 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 BAG1Q99933 345 aaPredicted RBP14.63□□□□□ -0.07
RAB5C-205ENST00000550013 C14orf105Q9NVL8 296 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 CSMD2Q7Z408 3487 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 ADGRG4Q8IZF6 3080 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 AKAP9Q99996 3911 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 LOC102723996A0A087X1L8 192 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 A0A0A6YYC8 382 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-205ENST00000550013 I3L1I5 382 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-205ENST00000550013 MYO1CO00159 1063 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 P2RX6O15547 441 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 PRPF4O43172 522 aaKnown RBP eCLIP14.62□□□□□ -0.07
RAB5C-205ENST00000550013 WISP2O76076 250 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 VAPBO95292 243 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 MGAT1P26572 445 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 ATP5DP30049 168 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 MAT1AQ00266 395 aaKnown RBP14.62□□□□□ -0.07
RAB5C-205ENST00000550013 NAA25Q14CX7 972 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 KCTD19Q17RG1 926 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-205ENST00000550013 ANKRD20A4Q4UJ75 823 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 ACSBG2Q5FVE4 666 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 ZNF425Q6IV72 752 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 LRRC8BQ6P9F7 803 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 TMEM207Q6UWW9 146 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 RIPOR1Q6ZS17 1223 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 ZC3H7AQ8IWR0 971 aaKnown RBP14.62□□□□□ -0.07
RAB5C-205ENST00000550013 SMPDL3AQ92484 453 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 MFSD3Q96ES6 412 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 MVB12AQ96EY5 273 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 OR2A5Q96R48 311 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 TGIF2Q9GZN2 237 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 IL22Q9GZX6 179 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 ZNF700Q9H0M5 742 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 MKKSQ9NPJ1 570 aaPredicted RBP14.62□□□□□ -0.07
RAB5C-205ENST00000550013 EIF2B3Q9NR50 452 aaKnown RBP14.62□□□□□ -0.07
RAB5C-205ENST00000550013 SYBUQ9NX95 663 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 ABI3Q9P2A4 366 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 TAC3Q9UHF0 121 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 SH3BGRL2Q9UJC5 107 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 F8P00451 2351 aa14.62□□□□□ -0.07
RAB5C-205ENST00000550013 SCN3AQ9NY46 2000 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 CCL21O00585 134 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 RASAL1O95294 804 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 STATHP02808 62 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 SNRPB2P08579 225 aaKnown RBP14.61□□□□□ -0.07
RAB5C-205ENST00000550013 ANXA5P08758 320 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 NPY2RP49146 381 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 BASP1P80723 227 aaKnown RBP14.61□□□□□ -0.07
RAB5C-205ENST00000550013 PMP22Q01453 160 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 SIX1Q15475 284 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-205ENST00000550013 TYSND1Q2T9J0 566 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 GARNL3Q5VVW2 1013 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 ICE2Q659A1 982 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 TMEM205Q6UW68 189 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 NEK10Q6ZWH5 1172 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 PLD3Q8IV08 490 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 SHISA5Q8N114 240 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 PPFIBP2Q8ND30 876 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 PKP4Q99569 1192 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 DRC3Q9H069 523 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 ABCF3Q9NUQ8 709 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 BFARQ9NZS9 450 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 SUCOQ9UBS9 1254 aaKnown RBP14.61□□□□□ -0.07
RAB5C-205ENST00000550013 SEC14L3Q9UDX4 400 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 PCYOX1Q9UHG3 505 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 MKL2Q9ULH7 1088 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 CRYL1Q9Y2S2 319 aa14.61□□□□□ -0.07
RAB5C-205ENST00000550013 KLF2Q9Y5W3 355 aaPredicted RBP14.61□□□□□ -0.07
RAB5C-205ENST00000550013 IGHV3-20A0A0C4DH32 117 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 HAT1O14929 419 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 PRAMEF2O60811 474 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 PHF2O75151 1096 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 PSIP1O75475 530 aaKnown RBP14.6□□□□□ -0.07
RAB5C-205ENST00000550013 SEC24DO94855 1032 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-205ENST00000550013 F7P08709 466 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-205ENST00000550013 CHRM3P20309 590 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 CA7P43166 264 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 PNLIPRP1P54315 467 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 ZNF33BQ06732 778 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 PRDX1Q06830 199 aaKnown RBP14.6□□□□□ -0.07
RAB5C-205ENST00000550013 KCNJ11Q14654 390 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 KLHL38Q2WGJ6 581 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 ABHD17BQ5VST6 288 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 MRNIPQ6NTE8 343 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 MRGPRGQ86SM5 289 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 SDCCAG8Q86SQ7 713 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-205ENST00000550013 DNAJB8Q8NHS0 232 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 RERGQ96A58 199 aaPredicted RBP14.6□□□□□ -0.07
RAB5C-205ENST00000550013 IMMP1LQ96LU5 166 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 SLC30A3Q99726 388 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 KIFC1Q9BW19 673 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 RNF32Q9H0A6 362 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 RUBCNLQ9H714 662 aa14.6□□□□□ -0.07
RAB5C-205ENST00000550013 CCDC168Q8NDH2 2452 aa14.59□□□□□ -0.07
RAB5C-205ENST00000550013 NCOA6Q14686 2063 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms