RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TPD52L3Q96J77 140 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 ADGRE3Q9BY15 652 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 RAD18Q9NS91 495 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 GPR83Q9NYM4 423 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 ZNF221Q9UK13 617 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 RPS6KA6Q9UK32 745 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 PCDHB1Q9Y5F3 818 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 PCDHGA3Q9Y5H0 932 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 CLIC1O00299 241 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 NBNO60934 754 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 ZNF623O75123 536 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 SLC25A14O95258 325 aaPredicted RBP13.31□□□□□ -0.28
HDAC7-228ENST00000548938 C9P02748 559 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 CDK1P06493 297 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 ADORA3P0DMS8 318 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 ENGP17813 658 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 RGS4P49798 205 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 TWF1Q12792 350 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 SERPINA9Q86WD7 417 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 GATAD2AQ86YP4 633 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 ELMOD1Q8N336 334 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 BEND7Q8N7W2 519 aaPredicted RBP13.31□□□□□ -0.28
HDAC7-228ENST00000548938 OR6F1Q8NGZ6 308 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 SDHCQ99643 169 aaPredicted RBP13.31□□□□□ -0.28
HDAC7-228ENST00000548938 GABARAPL3Q9BY60 117 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 NUAK2Q9H093 628 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 CREBZFQ9NS37 354 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 OLA1Q9NTK5 396 aaKnown RBP13.31□□□□□ -0.28
HDAC7-228ENST00000548938 IL17CQ9P0M4 197 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 RAPGEFL1Q9UHV5 662 aa13.31□□□□□ -0.28
HDAC7-228ENST00000548938 AP3D1O14617 1153 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 HOXC11O43248 304 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-228ENST00000548938 ZW10O43264 779 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 KDELR3O43731 214 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 MFN2O95140 757 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 STSP08842 583 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 CTPS1P17812 591 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 EPORP19235 508 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 OR2B6P58173 313 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 DEFA1P59665 94 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 DEFA3P59666 94 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 ARHGEF7Q14155 803 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 NXNL2Q5VZ03 156 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 LINGO4Q6UY18 593 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 CBLL1Q75N03 491 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 EIF3MQ7L2H7 374 aaKnown RBP13.3□□□□□ -0.28
HDAC7-228ENST00000548938 SELENOMQ8WWX9 145 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 NELL1Q92832 810 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 FUBP3Q96I24 572 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDAC7-228ENST00000548938 TLR8Q9NR97 1041 aaKnown RBP13.3□□□□□ -0.28
HDAC7-228ENST00000548938 TAS2R16Q9NYV7 291 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 A0A0U1RQF3 1178 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 PDZK1P1A8MUH7 402 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 H3BNC9 293 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 CLDN9O95484 217 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 KRT6AP02538 564 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 APOA1P02647 267 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 KRT6BP04259 564 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
HDAC7-228ENST00000548938 HSMCR30P0CW71 290 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 CXCR2P25025 360 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 KRT6CP48668 564 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 ACLYP53396 1101 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 UGT2B15P54855 530 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 NFE2Q16621 373 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-228ENST00000548938 IQCCQ4KMZ1 466 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 INO80DQ53TQ3 878 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-228ENST00000548938 SPANXN2Q5MJ10 180 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 RNF180Q86T96 592 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 ZNF280BQ86YH2 543 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-228ENST00000548938 TCAIMQ8N3R3 496 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 UBTD2Q8WUN7 234 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 MYDGFQ969H8 173 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 TESCQ96BS2 214 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 APIPQ96GX9 242 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 UROC1Q96N76 676 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 PANX1Q96RD7 426 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 ADAM2Q99965 735 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 CFHR5Q9BXR6 569 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 CEP44Q9C0F1 390 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 OR2B2Q9GZK3 357 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 DDX28Q9NUL7 540 aaKnown RBP13.3□□□□□ -0.28
HDAC7-228ENST00000548938 TMEM184CQ9NVA4 438 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 ERVK13-1Q9NX77 482 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 PEX16Q9Y5Y5 336 aa13.3□□□□□ -0.28
HDAC7-228ENST00000548938 CLCA1A8K7I4 914 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 A8MV72 311 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-228ENST00000548938 M0R129 80 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 PRAMEF1O95521 474 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 ALPIP09923 528 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 HOXD10P28358 340 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 MAGEA11P43364 429 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 HTR3AP46098 478 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 SGSHP51688 502 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 CSNK2BP67870 215 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 RING1Q06587 406 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 TP53BP2Q13625 1128 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 TRIM71Q2Q1W2 868 aaKnown RBP13.29□□□□□ -0.28
HDAC7-228ENST00000548938 ARMCX4Q5H9R4 360 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms