RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 REXO1L1PQ8IX06 675 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 FAM20CQ8IXL6 584 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 PPIL6Q8IXY8 311 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 MYO1HQ8N1T3 1032 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
GCN1-205ENST00000548821 LKAAEAR1Q8TD35 194 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 ANP32BQ92688 251 aaKnown RBP9.18□□□□□ -0.94
GCN1-205ENST00000548821 ZNF669Q96BR6 464 aaPredicted RBP9.18□□□□□ -0.94
GCN1-205ENST00000548821 BARD1Q99728 777 aaKnown RBP9.18□□□□□ -0.94
GCN1-205ENST00000548821 NRTNQ99748 197 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 HAUS8Q9BT25 410 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.18□□□□□ -0.94
GCN1-205ENST00000548821 CLK4Q9HAZ1 481 aaKnown RBP9.18□□□□□ -0.94
GCN1-205ENST00000548821 ZNF160Q9HCG1 818 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 SLC22A11Q9NSA0 550 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 LUZP4Q9P127 313 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 SUCOQ9UBS9 1254 aaKnown RBP9.18□□□□□ -0.94
GCN1-205ENST00000548821 TAC3Q9UHF0 121 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 HECTD1Q9ULT8 2610 aa9.18□□□□□ -0.94
GCN1-205ENST00000548821 CORO1CQ9ULV4 474 aaPredicted RBP9.18□□□□□ -0.94
GCN1-205ENST00000548821 NOVA2Q9UNW9 492 aaKnown RBP9.18□□□□□ -0.94
GCN1-205ENST00000548821 A0A1W2PQ72 361 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 SYNDIG1LA6NDD5 238 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 WIPF3A6NGB9 483 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 ENO4A6NNW6 628 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 ARHGEF33A8MVX0 844 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 GOLGA8KD6RF30 607 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 E7ENX8 843 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 GOLGA8TH3BQL2 631 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 SLC16A8O95907 504 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 C8orf89P0DMQ9 161 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 MCM3P25205 808 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 CXCR5P32302 372 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 HPDP32754 393 aaPredicted RBP9.17□□□□□ -0.94
GCN1-205ENST00000548821 COILP38432 576 aaPredicted RBP9.17□□□□□ -0.94
GCN1-205ENST00000548821 VPS41P49754 854 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 CLCN7P51798 805 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 TAP2Q03519 686 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 MRPL49Q13405 166 aaKnown RBP9.17□□□□□ -0.94
GCN1-205ENST00000548821 TRIP13Q15645 432 aaPredicted RBP9.17□□□□□ -0.94
GCN1-205ENST00000548821 EXT1Q16394 746 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 ACSBG2Q5FVE4 666 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 FRMPD2BQ6IN97 320 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 CAPN13Q6MZZ7 669 aaPredicted RBP9.17□□□□□ -0.94
GCN1-205ENST00000548821 SUSD1Q6UWL2 747 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 CES3Q6UWW8 571 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 LINC00696Q6ZRV3 163 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 CENPUQ71F23 418 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 PRUNE1Q86TP1 453 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 CUZD1Q86UP6 607 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 KCNMB4Q86W47 210 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 PAQR7Q86WK9 346 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 C17orf64Q86WR6 236 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 GAS2L3Q86XJ1 694 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 RASGEF1CQ8N431 466 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 PRELID2Q8N945 189 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 FAM98AQ8NCA5 519 aaKnown RBP9.17□□□□□ -0.94
GCN1-205ENST00000548821 C7orf57Q8NEG2 295 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 OR1N1Q8NGS0 311 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 C19orf60Q96EN9 201 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 ZNF354BQ96LW1 612 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 SERPINB12Q96P63 405 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 OR2A5Q96R48 311 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 PKP4Q99569 1192 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 RNF32Q9H0A6 362 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 PARVBQ9HBI1 364 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 ANKHQ9HCJ1 492 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 OLAHQ9NV23 265 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 STMN3Q9NZ72 180 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 CTSFQ9UBX1 484 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 CIDEBQ9UHD4 219 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 PCYOX1Q9UHG3 505 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 FBXO5Q9UKT4 447 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 MKL2Q9ULH7 1088 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 PPP2R2CQ9Y2T4 447 aa9.17□□□□□ -0.94
GCN1-205ENST00000548821 BSNQ9UPA5 3926 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 LOC105369274A0A096LPK9 316 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 LOC102723532A0A0G2JNH3 316 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 A0A0U1RQJ8 604 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 A0A1W2PPV9 198 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 CNOT3O75175 753 aaKnown RBP9.16□□□□□ -0.94
GCN1-205ENST00000548821 SEMA7AO75326 666 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 ALOX12BO75342 701 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 AVILO75366 819 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 NSA2O95478 260 aaKnown RBP9.16□□□□□ -0.94
GCN1-205ENST00000548821 PRR35P0CG20 571 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 PGAM1P18669 254 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 JAK1P23458 1154 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 ARNTP27540 789 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 PSMB5P28074 263 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 AP1S2P56377 157 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 TAS2R50P59544 299 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 IL2P60568 153 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 ACTN3Q08043 901 aaPredicted RBP9.16□□□□□ -0.94
GCN1-205ENST00000548821 FASTKQ14296 549 aaKnown RBP9.16□□□□□ -0.94
GCN1-205ENST00000548821 HERC3Q15034 1050 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 HIF1AQ16665 826 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 CYP1B1Q16678 543 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 VWA2Q5GFL6 755 aa9.16□□□□□ -0.94
GCN1-205ENST00000548821 SPANXN3Q5MJ09 141 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms