RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 COX6A1P12074 109 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 ENO3P13929 434 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 HSD17B2P37059 387 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 SKIV2L2P42285 1042 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 GLRBP48167 497 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 PRDX1Q06830 199 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 THOC5Q13769 683 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 ZNF169Q14929 603 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 ATG9BQ674R7 924 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 B3GNTL1Q67FW5 361 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 LRRC56Q8IYG6 542 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 CD200R1Q8TD46 325 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 COG1Q8WTW3 980 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 ASB11Q8WXH4 323 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 MAGOHBQ96A72 148 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 C14orf105Q9NVL8 296 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 TRPC4Q9UBN4 977 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 PCYOX1Q9UHG3 505 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 ZGRF1Q86YA3 2104 aa16.55■□□□□ 0.24
CHMP1A-205ENST00000548650 MAGEB16A2A368 324 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 IDSB3KWA1 339 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 SMAPO00193 183 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 HAT1O14929 419 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 PRPF4O43172 522 aaKnown RBP eCLIP16.54■□□□□ 0.245e-7■■■■□ 23.9
CHMP1A-205ENST00000548650 FOXS1O43638 330 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 MPC1LP0DKB6 136 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 IMPA1P29218 277 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 COILP38432 576 aaPredicted RBP16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 MPP1Q00013 466 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 RELAQ04206 551 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 MFAP5Q13361 173 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 GARNL3Q5VVW2 1013 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 CCDC137Q6PK04 289 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 ISLR2Q6UXK2 745 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 PIWIL4Q7Z3Z4 852 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 LAPTM4BQ86VI4 370 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 CPNE9Q8IYJ1 553 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 NAT8LQ8N9F0 302 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 ST6GALNAC3Q8NDV1 305 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 DNAJB14Q8TBM8 379 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 CNDP1Q96KN2 507 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 GPR21Q99679 349 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 AGPAT4Q9NRZ5 378 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 CDC14AQ9UNH5 594 aa16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 DIDO1Q9BTC0 2240 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-205ENST00000548650 CROCCQ5TZA2 2017 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 GFYI3L273 518 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 KLHL18O94889 574 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 CLDN1O95832 211 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 SYF2O95926 243 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 SOX11P35716 441 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 SLC26A3P40879 764 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 EFNA3P52797 238 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 SNRPNP63162 240 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 ABATP80404 500 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 TLR1Q15399 786 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 LONRF1Q17RB8 773 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 CYHR1Q6ZMK1 362 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 LINC00696Q6ZRV3 163 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 ZC3H7AQ8IWR0 971 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 LMNTD2Q8IXW0 634 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 PBKQ96KB5 322 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 SIGLEC10Q96LC7 697 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 DRC3Q9H069 523 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 CCDC68Q9H2F9 335 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 C20orf96Q9NUD7 363 aaPredicted RBP16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 SLC5A6Q9Y289 635 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 DHRS7Q9Y394 339 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 MRPS2Q9Y399 296 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 JRKLQ9Y4A0 524 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 CENPEQ02224 2701 aa16.53■□□□□ 0.24
CHMP1A-205ENST00000548650 IGHV1-45A0A0A0MS14 117 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 A0A0A6YYC8 382 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 NSG1A0A0A6YYJ2 146 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 I3L1I5 382 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 PGRMC1O00264 195 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 TBPL1P62380 186 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 EEF1A2Q05639 463 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 CDC16Q13042 620 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 ELOAQ14241 798 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 NDUFAF7Q7L592 441 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 MAMDC2Q7Z304 686 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 ADCK2Q7Z695 626 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 KCNMB4Q86W47 210 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 PLD3Q8IV08 490 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 KBTBD2Q8IY47 623 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 GRHL3Q8TE85 626 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 PSMF1Q92530 271 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 RERGQ96A58 199 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 MMABQ96EY8 250 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 C5orf34Q96MH7 638 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 FAM167BQ9BTA0 163 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 TGIF2Q9GZN2 237 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 MKKSQ9NPJ1 570 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 ABCF3Q9NUQ8 709 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 UTP6Q9NYH9 597 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 FBXO5Q9UKT4 447 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 MAD1L1Q9Y6D9 718 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 COMMD10Q9Y6G5 202 aa16.52■□□□□ 0.24
CHMP1A-205ENST00000548650 ITPR2Q14571 2701 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms