RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 TRPV4Q9HBA0 871 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 CHKBQ9Y259 395 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 R4GN57 208 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 ACEP12821 1306 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 A0A1W2PRV1 198 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 LRRD1A4D1F6 860 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 KBTBD13C9JR72 458 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 P2RY10O00398 339 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 HNF4AP41235 474 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 CDX1P47902 265 aaPredicted RBP3.73□□□□□ -1.81
VPS29-205ENST00000548539 ALDH3A2P51648 485 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 DLX5P56178 289 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 MAZP56270 477 aaKnown RBP3.73□□□□□ -1.81
VPS29-205ENST00000548539 NME5P56597 212 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 LINC01547P58512 204 aaPredicted RBP3.73□□□□□ -1.81
VPS29-205ENST00000548539 ASIC1P78348 528 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 POU3F1Q03052 451 aaPredicted RBP3.73□□□□□ -1.81
VPS29-205ENST00000548539 TRAP1Q12931 704 aaKnown RBP3.73□□□□□ -1.81
VPS29-205ENST00000548539 ACCSLQ4AC99 568 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 C19orf48Q6RUI8 117 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 TMEM270Q6UE05 265 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 NHLRC1Q6VVB1 395 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 KCTD9Q7L273 389 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 ANKRD33Q7Z3H0 272 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 SMIM29Q86T20 159 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 TRPT1Q86TN4 253 aaKnown RBP3.73□□□□□ -1.81
VPS29-205ENST00000548539 UNC45BQ8IWX7 931 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 NAT8LQ8N9F0 302 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 SPC24Q8NBT2 197 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 KIAA0895Q8NCT3 520 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 OR13C3Q8NGS6 347 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 LRRC8CQ8TDW0 803 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 AK8Q96MA6 479 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 GDAP1L1Q96MZ0 367 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 KLHL5Q96PQ7 755 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 MAP3K3Q99759 626 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 CDK19Q9BWU1 502 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 SLC5A7Q9GZV3 580 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 SRD5A3Q9H8P0 318 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 IARS2Q9NSE4 1012 aaKnown RBP3.73□□□□□ -1.81
VPS29-205ENST00000548539 VPS18Q9P253 973 aa3.73□□□□□ -1.81
VPS29-205ENST00000548539 RUVBL2Q9Y230 463 aaKnown RBP3.73□□□□□ -1.81
VPS29-205ENST00000548539 A0A0A6YYC8 382 aaPredicted RBP3.72□□□□□ -1.81
VPS29-205ENST00000548539 C17orf105B2RV13 164 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 I3L1I5 382 aaPredicted RBP3.72□□□□□ -1.81
VPS29-205ENST00000548539 SOCS5O75159 536 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 SLC22A3O75751 556 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 SLC16A8O95907 504 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 GH1P01241 217 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 C9P02748 559 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 APOHP02749 345 aaPredicted RBP3.72□□□□□ -1.81
VPS29-205ENST00000548539 HMOX1P09601 288 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 DLATP10515 647 aaKnown RBP3.72□□□□□ -1.81
VPS29-205ENST00000548539 CA6P23280 308 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 SERPINB6P35237 376 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 NPBWR1P48145 328 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 UBXN1Q04323 297 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 CACNG1Q06432 222 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 SULT2A1Q06520 285 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 P2RY6Q15077 328 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 GPR33Q49SQ1 333 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 SLC39A12Q504Y0 691 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 SPOUT1Q5T280 376 aaKnown RBP3.72□□□□□ -1.81
VPS29-205ENST00000548539 CCNYL2Q5T2Q4 361 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 C20orf194Q5TEA3 1177 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 STPG1Q5TH74 334 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 ARHGEF16Q5VV41 709 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 TTC27Q6P3X3 843 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 RAPH1Q70E73 1250 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 SLC16A9Q7RTY1 509 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 PHLDB2Q86SQ0 1253 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 PIGZQ86VD9 579 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 CCDC83Q8IWF9 413 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 AQP12AQ8IXF9 295 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 CLYBLQ8N0X4 340 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 LRTM2Q8N967 370 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 OR4C3Q8NH37 302 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 NCOA7Q8NI08 942 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 UBLCP1Q8WVY7 318 aaPredicted RBP3.72□□□□□ -1.81
VPS29-205ENST00000548539 PIGQQ9BRB3 760 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 ACTL8Q9H568 366 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 ZNF334Q9HCZ1 680 aaPredicted RBP3.72□□□□□ -1.81
VPS29-205ENST00000548539 IL1RAPL2Q9NP60 686 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 SIX2Q9NPC8 291 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 CHST11Q9NPF2 352 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 INTS9Q9NV88 658 aaKnown RBP3.72□□□□□ -1.81
VPS29-205ENST00000548539 DNAJC17Q9NVM6 304 aaKnown RBP3.72□□□□□ -1.81
VPS29-205ENST00000548539 ADPRHL2Q9NX46 363 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 TMEM161AQ9NX61 479 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 FBXL5Q9UKA1 691 aa3.72□□□□□ -1.81
VPS29-205ENST00000548539 E5RGE8 158 aa3.71□□□□□ -1.82
VPS29-205ENST00000548539 BMPR1BO00238 502 aa3.71□□□□□ -1.82
VPS29-205ENST00000548539 TTI1O43156 1089 aa3.71□□□□□ -1.82
VPS29-205ENST00000548539 KINO60870 393 aaKnown RBP3.71□□□□□ -1.82
VPS29-205ENST00000548539 CRCPO75575 148 aa3.71□□□□□ -1.82
VPS29-205ENST00000548539 MOCS2O96007 188 aaPredicted RBP3.71□□□□□ -1.82
VPS29-205ENST00000548539 PRSS1P07477 247 aa3.71□□□□□ -1.82
VPS29-205ENST00000548539 SP9P0CG40 484 aa3.71□□□□□ -1.82
VPS29-205ENST00000548539 UROSP10746 265 aa3.71□□□□□ -1.82
VPS29-205ENST00000548539 F3P13726 295 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms