RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 A0A0J9YVX5 310 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 NCF1BA6NI72 391 aaPredicted RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 NCF1CA8MVU1 366 aaPredicted RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 ZSCAN9O15535 394 aaPredicted RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 ZNF749O43361 778 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 ONECUT2O95948 504 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 KLK3P07288 261 aaPredicted RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 NCF1P14598 390 aaPredicted RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 GNAZP19086 355 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 RORAP35398 523 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 GRK3P35626 688 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 ALDH18A1P54886 795 aaKnown RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 UCNP55089 124 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 TLE3Q04726 772 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 E2F2Q14209 437 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 GRM7Q14831 915 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 ST3GAL2Q16842 350 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 DEFB110Q30KQ9 67 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 MANEAQ5SRI9 462 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 FRMPD2BQ6IN97 320 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 DSELQ8IZU8 1212 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 TMEM151AQ8N4L1 468 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 SLC38A9Q8NBW4 561 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 PROKR1Q8TCW9 393 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 SLC5A11Q8WWX8 675 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 NEIL2Q969S2 332 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 ALKBH8Q96BT7 664 aaKnown RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 CCNL2Q96S94 520 aaPredicted RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 EFHD1Q9BUP0 239 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 PITHD1Q9GZP4 211 aaPredicted RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 MRPL46Q9H2W6 279 aaKnown RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 EHD1Q9H4M9 534 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 ACTR5Q9H9F9 607 aaPredicted RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 LHX9Q9NQ69 397 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 DNAJC11Q9NVH1 559 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 WWOXQ9NZC7 414 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 TBK1Q9UHD2 729 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 DCDC2Q9UHG0 476 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 SH2B3Q9UQQ2 575 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 DYRK1BQ9Y463 629 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 TNPO3Q9Y5L0 923 aaKnown RBP13.85□□□□□ -0.19
DDX54-203ENST00000546869 FRYQ5TBA9 3013 aa13.85□□□□□ -0.19
DDX54-203ENST00000546869 ACACAQ13085 2346 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 LOC105369274A0A096LPK9 316 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 LOC102723532A0A0G2JNH3 316 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 CCDC151A5D8V7 595 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 H0YGG7 62 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 UBXN8O00124 270 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 MEN1O00255 615 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 TERTO14746 1132 aaKnown RBP13.84□□□□□ -0.19
DDX54-203ENST00000546869 HAT1O14929 419 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 KLK10O43240 276 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 ERLIN1O75477 346 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 WDR47O94967 919 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 RECKO95980 971 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 NTRK1P04629 796 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 CDH1P12830 882 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 CXCR2P25025 360 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 STAT5AP42229 794 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 CASP2P42575 452 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 GDF5P43026 501 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 GLRBP48167 497 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 ARF3P61204 181 aaPredicted RBP13.84□□□□□ -0.19
DDX54-203ENST00000546869 CDC16Q13042 620 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 SETDB1Q15047 1291 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 PCBP2Q15366 365 aaKnown RBP eCLIP13.84□□□□□ -0.19
DDX54-203ENST00000546869 TGIF1Q15583 401 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 PRTGQ2VWP7 1150 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 WASHC2DQ5SRD0 308 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 GARNL3Q5VVW2 1013 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 BROXQ5VW32 411 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 ZNF385CQ66K41 422 aaPredicted RBP13.84□□□□□ -0.19
DDX54-203ENST00000546869 ATG9BQ674R7 924 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 NXPE4Q6UWF7 544 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 LRRC70Q7Z2Q7 622 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 OR4N4Q8N0Y3 316 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 CYP4X1Q8N118 509 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 TTC29Q8NA56 475 aaPredicted RBP13.84□□□□□ -0.19
DDX54-203ENST00000546869 GALNT6Q8NCL4 622 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 EPS8L3Q8TE67 593 aaKnown RBP13.84□□□□□ -0.19
DDX54-203ENST00000546869 SNRNP27Q8WVK2 155 aaKnown RBP13.84□□□□□ -0.19
DDX54-203ENST00000546869 HNRNPLLQ8WVV9 542 aaKnown RBP13.84□□□□□ -0.19
DDX54-203ENST00000546869 TM4SF19Q96DZ7 209 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 WDR34Q96EX3 536 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 NT5DC2Q9H857 520 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 ABCF3Q9NUQ8 709 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 PCMTD2Q9NV79 361 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 ZNF358Q9NW07 568 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 COPG2Q9UBF2 871 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 LGALS13Q9UHV8 139 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 PCDHGA6Q9Y5G7 932 aa13.84□□□□□ -0.19
DDX54-203ENST00000546869 URB1O60287 2271 aaKnown RBP13.84□□□□□ -0.19
DDX54-203ENST00000546869 PCM1Q15154 2024 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 TRBC2A0A5B9 178 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 SUPT3HB4E1H0 165 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 C21orf140B9A014 251 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 STX16-NPEPL1H3BU86 382 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 STX16O14662 325 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 NRP2O60462 931 aa13.83□□□□□ -0.2
DDX54-203ENST00000546869 SUPT3HO75486 399 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms