RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SYT16Q17RD7 645 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 IRAK1BP1Q5VVH5 260 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 GARNL3Q5VVW2 1013 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 ICE2Q659A1 982 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 KIAA0930Q6ICG6 404 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-221ENST00000546229 HIBCHQ6NVY1 386 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-221ENST00000546229 CES3Q6UWW8 571 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 PRSS41Q7RTY9 318 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 VN1R4Q7Z5H5 301 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 CSNK1A1LQ8N752 337 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 FBXO15Q8NCQ5 510 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-221ENST00000546229 ZNF480Q8WV37 535 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 FAM136AQ96C01 138 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 CABS1Q96KC9 395 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 NPAS2Q99743 824 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 RIC8BQ9NVN3 520 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 TRPC4Q9UBN4 977 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 TSR3Q9UJK0 312 aaKnown RBP11.91□□□□□ -0.5
COPS7A-221ENST00000546229 SOX13Q9UN79 622 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 ZNF148Q9UQR1 794 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 KLF2Q9Y5W3 355 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-221ENST00000546229 PKDREJQ9NTG1 2253 aa11.91□□□□□ -0.5
COPS7A-221ENST00000546229 E7EVH7 732 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 HAT1O14929 419 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 VAPBO95292 243 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 SLC16A8O95907 504 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 F10P00742 488 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 ESR1P03372 595 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 EIF2S1P05198 315 aaKnown RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 PTMAP06454 111 aaKnown RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 F7P08709 466 aaPredicted RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 TPSB2P20231 275 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 OGNP20774 298 aaKnown RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 CMPK1P30085 196 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 SKIV2L2P42285 1042 aaKnown RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 CA7P43166 264 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 MAGEA6P43360 314 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 EMP2P54851 167 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 ARG2P78540 354 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 MAT1AQ00266 395 aaKnown RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 PRDX1Q06830 199 aaKnown RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 NAA25Q14CX7 972 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 CDSNQ15517 529 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 TPSAB1Q15661 275 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 CCNG2Q16589 344 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 SEL1L2Q5TEA6 688 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 SP5Q6BEB4 398 aaPredicted RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 H3F3CQ6NXT2 135 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 ZNF549Q6P9A3 640 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 MCEMP1Q8IX19 187 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 SMPDL3AQ92484 453 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 VPS50Q96JG6 964 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 PKP4Q99569 1192 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 VN1R1Q9GZP7 353 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 MRPS30Q9NP92 439 aaKnown RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 MKKSQ9NPJ1 570 aaPredicted RBP11.9□□□□□ -0.5
COPS7A-221ENST00000546229 TAC3Q9UHF0 121 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 ANAPC5Q9UJX4 755 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 MRFAP1Q9Y605 127 aa11.9□□□□□ -0.5
COPS7A-221ENST00000546229 CACNA1CQ13936 2221 aa11.9□□□□□ -0.51
COPS7A-221ENST00000546229 CCDC168Q8NDH2 2452 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 PCNX1Q96RV3 2341 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 A0A0A6YYC8 382 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-221ENST00000546229 PRSS44E7EML9 344 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 I3L1I5 382 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-221ENST00000546229 NDUFS3O75489 264 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 ELAVL4P26378 380 aaKnown RBP11.89□□□□□ -0.51
COPS7A-221ENST00000546229 FMO4P31512 558 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 PNLIPRP1P54315 467 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 ADORA2A-AS1P86434 159 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 PMP22Q01453 160 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 FAM53BQ14153 422 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 KLHL38Q2WGJ6 581 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-221ENST00000546229 MEI1Q5TIA1 1274 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 FAAH2Q6GMR7 532 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 LRRC8BQ6P9F7 803 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 TTC23LQ6PF05 361 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 BNC2Q6ZN30 1099 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-221ENST00000546229 LANCL3Q6ZV70 420 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 NEK10Q6ZWH5 1172 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 CILP2Q8IUL8 1156 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 PLD3Q8IV08 490 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 CHERPQ8IWX8 916 aaKnown RBP11.89□□□□□ -0.51
COPS7A-221ENST00000546229 REXO1L1PQ8IX06 675 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 AGGF1Q8N302 714 aaeCLIP11.89□□□□□ -0.51
COPS7A-221ENST00000546229 RNF10Q8N5U6 811 aaKnown RBP11.89□□□□□ -0.51
COPS7A-221ENST00000546229 CCDC89Q8N998 374 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 PPFIBP2Q8ND30 876 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 MAGEC3Q8TD91 643 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 TRIM8Q9BZR9 551 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 DRC3Q9H069 523 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 COPG2Q9UBF2 871 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 SH2B3Q9UQQ2 575 aa11.89□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF469Q96JG9 3925 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-221ENST00000546229 DYTNA2CJ06 578 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 OR5H15A6NDH6 313 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 H3BMM5 538 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 GFYI3L273 518 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 PRPF4O43172 522 aaKnown RBP eCLIP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms