RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 OXA1LQ15070 435 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 MAPK11Q15759 364 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 SYT16Q17RD7 645 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 TPRG1Q6ZUI0 275 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 ADCK1Q86TW2 530 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 SERPINA11Q86U17 422 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 CBARPQ8N350 705 aaPredicted RBP15.31■□□□□ 0.04
LDLR-204ENST00000545707 L3MBTL4Q8NA19 623 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 DNAJB8Q8NHS0 232 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 SCAMP4Q969E2 229 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 SCRN2Q96FV2 425 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 ZDHHC6Q9H6R6 413 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 TMEM165Q9HC07 324 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 ACOT13Q9NPJ3 140 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 PCDH10Q9P2E7 1040 aa15.31■□□□□ 0.04
LDLR-204ENST00000545707 NDRG4Q9ULP0 352 aaKnown RBP15.31■□□□□ 0.04
LDLR-204ENST00000545707 SOCS5O75159 536 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 EPN2O95208 641 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 OR56A5P0C7T3 313 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 CBSLP0DN79 551 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 SRCP12931 536 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 JUNDP17535 347 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 TNFRSF1BP20333 461 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 FPR1P21462 350 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 CBSP35520 551 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 PFN3P60673 137 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 RPP38P78345 283 aaKnown RBP15.3■□□□□ 0.04
LDLR-204ENST00000545707 PLEKHG6Q3KR16 790 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 SPOUT1Q5T280 376 aaKnown RBP15.3■□□□□ 0.04
LDLR-204ENST00000545707 LHX8Q68G74 356 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 GPR153Q6NV75 609 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 METTL2BQ6P1Q9 378 aaKnown RBP15.3■□□□□ 0.04
LDLR-204ENST00000545707 HS6ST3Q8IZP7 471 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 ZNF300Q96RE9 604 aaPredicted RBP15.3■□□□□ 0.04
LDLR-204ENST00000545707 GABARAPL1Q9H0R8 117 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 TMEM184CQ9NVA4 438 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 DNAJC11Q9NVH1 559 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 THUMPD1Q9NXG2 353 aaKnown RBP15.3■□□□□ 0.04
LDLR-204ENST00000545707 CFAP97Q9P2B7 532 aa15.3■□□□□ 0.04
LDLR-204ENST00000545707 ABT1Q9ULW3 272 aaKnown RBP15.3■□□□□ 0.04
LDLR-204ENST00000545707 TMEM202A6NGA9 273 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 KPNA4O00629 521 aaPredicted RBP15.29■□□□□ 0.04
LDLR-204ENST00000545707 RGS10O43665 173 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 WBP4O75554 376 aaKnown RBP15.29■□□□□ 0.04
LDLR-204ENST00000545707 CKMP06732 381 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 MAPK1P28482 360 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 MAGEA10P43363 369 aaPredicted RBP15.29■□□□□ 0.04
LDLR-204ENST00000545707 CRYBA2P53672 197 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 IRF8Q02556 426 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 KEAP1Q14145 624 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 CATSPEREQ5SY80 951 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 CMTM8Q8IZV2 173 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 MFSD4AQ8N468 514 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
LDLR-204ENST00000545707 KCNC2Q96PR1 638 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 HHIPQ96QV1 700 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 BTBD2Q9BX70 525 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.29■□□□□ 0.04
LDLR-204ENST00000545707 PABPN1LA6NDY0 278 aaKnown RBP15.29■□□□□ 0.04
LDLR-204ENST00000545707 OR2AG2A6NM03 316 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 SLC22A1O15245 554 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 ETHE1O95571 254 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 EFEMP2O95967 443 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 SEMG1P04279 462 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 C1SP09871 688 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 PRPS1L1P21108 318 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 ST13P50502 369 aaKnown RBP15.29■□□□□ 0.04
LDLR-204ENST00000545707 MVKQ03426 396 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 ABRQ12979 859 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 MTAPQ13126 283 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 XKR6Q5GH73 641 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 SYT6Q5T7P8 510 aaPredicted RBP15.29■□□□□ 0.04
LDLR-204ENST00000545707 PAGE2Q7Z2X7 111 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 DYNC2LI1Q8TCX1 351 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 DNASE1L2Q92874 299 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 APOL4Q9BPW4 351 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 MROQ9BYG7 248 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 SUV39H2Q9H5I1 410 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 REEP1Q9H902 201 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 ABCB8Q9NUT2 735 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 SLCO3A1Q9UIG8 710 aa15.29■□□□□ 0.04
LDLR-204ENST00000545707 E7EQ34 232 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 DNAJB5O75953 348 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 OPN1SWP03999 348 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 ABCB1P08183 1280 aaPredicted RBP15.28■□□□□ 0.04
LDLR-204ENST00000545707 ACPPP15309 386 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 GPX2P18283 190 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 C21orf33P30042 268 aaPredicted RBP15.28■□□□□ 0.04
LDLR-204ENST00000545707 NPRL3Q12980 569 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 DGUOKQ16854 277 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 CCSMST1Q4G0I0 132 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 GGTA1PQ4G0N0 100 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 PRSS36Q5K4E3 855 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 KIAA1614Q5VZ46 1190 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 CBLL1Q75N03 491 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 LILRA3Q8N6C8 439 aaPredicted RBP15.28■□□□□ 0.04
LDLR-204ENST00000545707 CHST14Q8NCH0 376 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 APH1BQ8WW43 257 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 LGALS12Q96DT0 336 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 VMP1Q96GC9 406 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms