RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 Q0VFX4 171 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 MRPL49Q13405 166 aaKnown RBP20.11■□□□□ 0.81
SCARB1-210ENST00000545493 RBM20Q5T481 1227 aaKnown RBP20.11■□□□□ 0.81
SCARB1-210ENST00000545493 PLD3Q8IV08 490 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 CNTN4Q8IWV2 1026 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 IQCKQ8N0W5 287 aa20.11■□□□□ 0.81
SCARB1-210ENST00000545493 WDR83Q9BRX9 315 aaKnown RBP20.11■□□□□ 0.81
SCARB1-210ENST00000545493 ZNF282Q9UDV7 671 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-210ENST00000545493 TRMT6Q9UJA5 497 aaKnown RBP20.11■□□□□ 0.81
SCARB1-210ENST00000545493 BLACEA4D250 179 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 KLHL41O60662 606 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 ABATP80404 500 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 DSG2Q14126 1118 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 VWA2Q5GFL6 755 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 MBOAT1Q6ZNC8 495 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 Q6ZS92 163 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 ADCK2Q7Z695 626 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 CUZD1Q86UP6 607 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 IGDCC3Q8IVU1 814 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 AMER3Q8N944 861 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 TM9SF4Q92544 642 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 MIEF2Q96C03 454 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 C8orf44Q96CB5 159 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 SNRNP40Q96DI7 357 aaKnown RBP20.1■□□□□ 0.81
SCARB1-210ENST00000545493 MVB12AQ96EY5 273 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 PSMG3-AS1Q96PY0 264 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 EBNA1BP2Q99848 306 aaKnown RBP20.1■□□□□ 0.81
SCARB1-210ENST00000545493 ILKAPQ9H0C8 392 aaPredicted RBP20.1■□□□□ 0.81
SCARB1-210ENST00000545493 C3orf18Q9UK00 162 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 PCDHGA10Q9Y5H3 936 aa20.1■□□□□ 0.81
SCARB1-210ENST00000545493 FOXS1O43638 330 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 ZBTB14O43829 449 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 RNF224P0DH78 156 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 IVDP26440 423 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 CARSP49589 748 aaKnown RBP20.09■□□□□ 0.81
SCARB1-210ENST00000545493 OCA2Q04671 838 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 CRB2Q5IJ48 1285 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 SPANXN3Q5MJ09 141 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 IGFL2Q6UWQ7 119 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 SLC29A3Q9BZD2 475 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 CCDC177Q9NQR7 707 aaPredicted RBP20.09■□□□□ 0.81
SCARB1-210ENST00000545493 ASF1BQ9NVP2 202 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 MAP10Q9P2G4 905 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 SH2B3Q9UQQ2 575 aa20.09■□□□□ 0.81
SCARB1-210ENST00000545493 RP1L1Q8IWN7 2480 aaPredicted RBP20.09■□□□□ 0.81
SCARB1-210ENST00000545493 NAV2Q8IVL1 2488 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 MAP2K7O14733 419 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 TTC4O95801 387 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 STATHP02808 62 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 COX6A1P12074 109 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 ACPPP15309 386 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 TCP1P17987 556 aaKnown RBP20.08■□□□□ 0.81
SCARB1-210ENST00000545493 SLC26A3P40879 764 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 EFNA3P52797 238 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 CDKN2DP55273 166 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 RELAQ04206 551 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 SP140Q13342 867 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 HIF1AQ16665 826 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 BBS9Q3SYG4 887 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 FHL5Q5TD97 284 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 THEMIS2Q5TEJ8 643 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 GARNL3Q5VVW2 1013 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 VN1R4Q7Z5H5 301 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 LAPTM4BQ86VI4 370 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 PARP9Q8IXQ6 854 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 ZADH2Q8N4Q0 377 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 PPP4R1Q8TF05 950 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 EEF1AKMT1Q8WVE0 214 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 RERGQ96A58 199 aaPredicted RBP20.08■□□□□ 0.81
SCARB1-210ENST00000545493 CERS2Q96G23 380 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 PWWP2AQ96N64 755 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 WDR77Q9BQA1 342 aaPredicted RBP20.08■□□□□ 0.81
SCARB1-210ENST00000545493 UTP6Q9NYH9 597 aaKnown RBP20.08■□□□□ 0.81
SCARB1-210ENST00000545493 NOVA2Q9UNW9 492 aaKnown RBP20.08■□□□□ 0.81
SCARB1-210ENST00000545493 PDE10AQ9Y233 779 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 NTNG1Q9Y2I2 539 aa20.08■□□□□ 0.81
SCARB1-210ENST00000545493 MRPS2Q9Y399 296 aaKnown RBP20.08■□□□□ 0.81
SCARB1-210ENST00000545493 H7BY64 318 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 SEMA7AO75326 666 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 TSPAN12O95859 305 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 HPP00738 406 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 ESPL1Q14674 2120 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 SYT16Q17RD7 645 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 ATG9BQ674R7 924 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 LRRC8EQ6NSJ5 796 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 PAQR3Q6TCH7 311 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 PCGF5Q86SE9 256 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 ZC3H7AQ8IWR0 971 aaKnown RBP20.07■□□□□ 0.8
SCARB1-210ENST00000545493 CISD2Q8N5K1 135 aaKnown RBP20.07■□□□□ 0.8
SCARB1-210ENST00000545493 MMABQ96EY8 250 aaPredicted RBP20.07■□□□□ 0.8
SCARB1-210ENST00000545493 CAPZA3Q96KX2 299 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 PRAP1Q96NZ9 151 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 LHPPQ9H008 270 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 DRC3Q9H069 523 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 ZNF160Q9HCG1 818 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 C14orf105Q9NVL8 296 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 TRPC4Q9UBN4 977 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 CDC14AQ9UNH5 594 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 CHMP2BQ9UQN3 213 aa20.07■□□□□ 0.8
SCARB1-210ENST00000545493 HIVEP3Q5T1R4 2406 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms