RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GPR87Q9BY21 358 aa7.09□□□□□ -1.27
CPSF7-224ENST00000544990 TWSG1Q9GZX9 223 aa7.09□□□□□ -1.27
CPSF7-224ENST00000544990 ACTR5Q9H9F9 607 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-224ENST00000544990 IRAK4Q9NWZ3 460 aa7.09□□□□□ -1.27
CPSF7-224ENST00000544990 NSMCE4AQ9NXX6 385 aa7.09□□□□□ -1.27
CPSF7-224ENST00000544990 UTP6Q9NYH9 597 aaKnown RBP7.09□□□□□ -1.27
CPSF7-224ENST00000544990 CROTQ9UKG9 612 aa7.09□□□□□ -1.27
CPSF7-224ENST00000544990 PLCL2Q9UPR0 1127 aa7.09□□□□□ -1.27
CPSF7-224ENST00000544990 RUVBL2Q9Y230 463 aaKnown RBP7.09□□□□□ -1.27
CPSF7-224ENST00000544990 AP1M2Q9Y6Q5 423 aa7.09□□□□□ -1.27
CPSF7-224ENST00000544990 CELSR3Q9NYQ7 3312 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 PABPN1LA6NDY0 278 aaKnown RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 ARHGEF33A8MVX0 844 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 TARM1B6A8C7 271 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 GFYI3L273 518 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 MYO1CO00159 1063 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 TP73O15350 636 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 ZNF749O43361 778 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 PRICKLE3O43900 615 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 OR2B3O76000 313 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 ATE1O95260 518 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 CCNDBP1O95273 360 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 SYF2O95926 243 aaKnown RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 C8GP07360 202 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 HIST1H2AGP0C0S8 130 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 SFTPCP11686 197 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 WT1P19544 449 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 HIST1H2ADP20671 130 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 MAGP20916 626 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 MCM3P25205 808 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 GABRB3P28472 473 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 CMPK1P30085 196 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 RPA3P35244 121 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 PNLIPRP1P54315 467 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 PLTPP55058 493 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 IL2P60568 153 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 MRPS25P82663 173 aaKnown RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 CLCQ05315 142 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 DNASE1L3Q13609 305 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 TSTA3Q13630 321 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 ZIC1Q15915 447 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 CYP2A13Q16696 494 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 WHAMMP3Q1A5X7 153 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 CCSMST1Q4G0I0 132 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 ANKRD34AQ69YU3 496 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 FAM45BPQ6NSW5 357 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 C8orf74Q6P047 294 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 TRMT10BQ6PF06 316 aaKnown RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 FIGLAQ6QHK4 219 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 CYHR1Q6ZMK1 362 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 UBE2R2Q712K3 238 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 SLC26A11Q86WA9 606 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 CPNE9Q8IYJ1 553 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 SYTL1Q8IYJ3 562 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 DSELQ8IZU8 1212 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 MYO1HQ8N1T3 1032 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 DNAJC22Q8N4W6 341 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 GPATCH11Q8N954 259 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 LMNTD1Q8N9Z9 388 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 MNS1Q8NEH6 495 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 GIMAP7Q8NHV1 300 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 FAM45AQ8TCE6 357 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 MCOLN3Q8TDD5 553 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 CT55Q8WUE5 264 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 ASB11Q8WXH4 323 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 SMPDL3AQ92484 453 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 STARD8Q92502 1023 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 CDKL2Q92772 493 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 EXTL1Q92935 676 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 RNF31Q96EP0 1072 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 HIST1H2AHQ96KK5 128 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 BBC3Q96PG8 261 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 NDNQ99608 321 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 HIST1H2AJQ99878 128 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 C17orf62Q9BQA9 187 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 DPH2Q9BQC3 489 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 H2AFJQ9BTM1 129 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 TMPRSS13Q9BYE2 586 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 TRIM54Q9BYV2 358 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 TRIM55Q9BYV6 548 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 FAM60AQ9NP50 221 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 SAYSD1Q9NPB0 183 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 TXLNGQ9NUQ3 528 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 MOCS1Q9NZB8 636 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 TXNDC16Q9P2K2 825 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 IL17BQ9UHF5 180 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 SRPK3Q9UPE1 567 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 FARSAQ9Y285 508 aaKnown RBP7.08□□□□□ -1.28
CPSF7-224ENST00000544990 MED16Q9Y2X0 877 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 VWA7Q9Y334 891 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 PCDHGA6Q9Y5G7 932 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 ANKRD12Q6UB98 2062 aa7.08□□□□□ -1.28
CPSF7-224ENST00000544990 DSPP15924 2871 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 LAMA5O15230 3695 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 C9J4A7 227 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 SLC16A5O15375 505 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 NKX2-8O15522 239 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 ZSCAN9O15535 394 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 SRPX2O60687 465 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms