RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 HSD17B3P37058 310 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 TCTE1Q5JU00 501 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 SULT1C3Q6IMI6 304 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 VASH2Q86V25 355 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 C17orf64Q86WR6 236 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 TDRPQ86YL5 185 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 OR4N4Q8N0Y3 316 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 TCAIMQ8N3R3 496 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 ARHGEF39Q8N4T4 335 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 IL22RA1Q8N6P7 574 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 HNRNPLLQ8WVV9 542 aaKnown RBP18.3■□□□□ 0.52
DDX55-211ENST00000544429 UBLCP1Q8WVY7 318 aaPredicted RBP18.3■□□□□ 0.52
DDX55-211ENST00000544429 N4BP2L2Q92802 583 aaPredicted RBP18.3■□□□□ 0.52
DDX55-211ENST00000544429 PRAP1Q96NZ9 151 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 SELENOSQ9BQE4 189 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 PARD6BQ9BYG5 372 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 PRORYQ9H606 182 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 PADI1Q9ULC6 663 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 RNF112Q9ULX5 631 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 SLC22A14Q9Y267 594 aa18.3■□□□□ 0.52
DDX55-211ENST00000544429 A0A0J9YVX5 310 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 K7ENP7 123 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 MEN1O00255 615 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 HAT1O14929 419 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 KLK8O60259 260 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 IPO13O94829 963 aaKnown RBP18.29■□□□□ 0.52
DDX55-211ENST00000544429 HBQ1P09105 142 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 F8A1P23610 371 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 TMPRSS3P57727 454 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 PRTGQ2VWP7 1150 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 C18orf21Q32NC0 220 aaPredicted RBP18.29■□□□□ 0.52
DDX55-211ENST00000544429 MANEAQ5SRI9 462 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 LGSNQ5TDP6 509 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 YOD1Q5VVQ6 348 aaPredicted RBP18.29■□□□□ 0.52
DDX55-211ENST00000544429 BROXQ5VW32 411 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 INO80CQ6PI98 192 aaPredicted RBP18.29■□□□□ 0.52
DDX55-211ENST00000544429 THOC6Q86W42 341 aaKnown RBP18.29■□□□□ 0.52
DDX55-211ENST00000544429 ZNF655Q8N720 491 aaPredicted RBP18.29■□□□□ 0.52
DDX55-211ENST00000544429 NEIL2Q969S2 332 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 EGFL8Q99944 293 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 FAM117AQ9C073 453 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 PPCSQ9HAB8 311 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 ABCF3Q9NUQ8 709 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 NUDT4Q9NZJ9 180 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 PSMC3IPQ9P2W1 217 aaPredicted RBP18.29■□□□□ 0.52
DDX55-211ENST00000544429 SRPK3Q9UPE1 567 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 PCDHGA6Q9Y5G7 932 aa18.29■□□□□ 0.52
DDX55-211ENST00000544429 H0YGG7 62 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 ONECUT2O95948 504 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 CAPN1P07384 714 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 NUDT17P0C025 328 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 CDH1P12830 882 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 GDF5P43026 501 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 EMP3P54852 163 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 ARF3P61204 181 aaPredicted RBP18.28■□□□□ 0.52
DDX55-211ENST00000544429 TECRLQ5HYJ1 363 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 LCN10Q6JVE6 187 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 MREGQ8N565 214 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 PROKR1Q8TCW9 393 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 UBTD2Q8WUN7 234 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 CRELD1Q96HD1 420 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 GBP5Q96PP8 586 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 DPH2Q9BQC3 489 aaPredicted RBP18.28■□□□□ 0.52
DDX55-211ENST00000544429 VPS11Q9H270 941 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 ZNF358Q9NW07 568 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 CROTQ9UKG9 612 aa18.28■□□□□ 0.52
DDX55-211ENST00000544429 NBEAQ8NFP9 2946 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 NCF1BA6NI72 391 aaPredicted RBP18.27■□□□□ 0.52
DDX55-211ENST00000544429 NCF1CA8MVU1 366 aaPredicted RBP18.27■□□□□ 0.52
DDX55-211ENST00000544429 C21orf140B9A014 251 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 MED26O95402 600 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 CCNYL3P0C7X3 344 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 NCF1P14598 390 aaPredicted RBP18.27■□□□□ 0.52
DDX55-211ENST00000544429 ITGAXP20702 1163 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 VSX2P58304 361 aaPredicted RBP18.27■□□□□ 0.52
DDX55-211ENST00000544429 RPS15AP62244 130 aaKnown RBP18.27■□□□□ 0.52
DDX55-211ENST00000544429 GRM7Q14831 915 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 COL28A1Q2UY09 1125 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 WASHC2DQ5SRD0 308 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 SH2D5Q6ZV89 423 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 VN1R4Q7Z5H5 301 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 TMEM151AQ8N4L1 468 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 CT55Q8WUE5 264 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 SLC5A11Q8WWX8 675 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 ALKBH8Q96BT7 664 aaKnown RBP18.27■□□□□ 0.52
DDX55-211ENST00000544429 CLIP3Q96DZ5 547 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 TM4SF19Q96DZ7 209 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 THAP11Q96EK4 314 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 SLC45A3Q96JT2 553 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 CABS1Q96KC9 395 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 CCDC77Q9BR77 488 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 CNOT10Q9H9A5 744 aaKnown RBP18.27■□□□□ 0.52
DDX55-211ENST00000544429 CPNE5Q9HCH3 593 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 CD274Q9NZQ7 290 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 ASB1Q9Y576 335 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 PCDHGA4Q9Y5G9 962 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 KCNE2Q9Y6J6 123 aa18.27■□□□□ 0.52
DDX55-211ENST00000544429 CCDC88CQ9P219 2028 aa18.27■□□□□ 0.51
DDX55-211ENST00000544429 IQANK1A0A1B0GTG1 560 aa18.26■□□□□ 0.51
DDX55-211ENST00000544429 SYCE1LA8MT33 242 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms