RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CX3CL1P78423 397 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 GLRA4Q5JXX5 417 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 C15orf39Q6ZRI6 1047 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 NRARPQ7Z6K4 114 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 MUC20Q8N307 709 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 KCNH5Q8NCM2 988 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 BICD1Q96G01 975 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 UTP14AQ9BVJ6 771 aaKnown RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 CACNG6Q9BXT2 260 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 GKN1Q9NS71 199 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 SLC38A7Q9NVC3 462 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ADAMTS7Q9UKP4 1686 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ANKRD36BQ8N2N9 1353 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 KIF13BQ9NQT8 1826 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 SAA2-SAA4A0A096LPE2 208 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 A0A1W2PPW3 197 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 A0A1W2PRB8 838 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 OOEPA6NGQ2 149 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 DUXAA6NLW8 204 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 PRR32B1ATL7 298 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 PROB1E7EW31 1015 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 PPIP5K2O43314 1243 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 BAG4O95429 457 aaKnown RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 IGKV2-30P06310 120 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 HMOX1P09601 288 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 TGFB3P10600 412 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 PLA2G2AP14555 144 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 CD27P26842 260 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 CCKBRP32239 447 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 MFAP5Q13361 173 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 CDC37Q16543 378 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ODF2Q5BJF6 829 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 SPDYCQ5MJ68 293 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ELFN2Q5R3F8 820 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 TXNRD3NBQ6F5E7 133 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 CYB5D1Q6P9G0 228 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 LINGO4Q6UY18 593 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 NHLRC1Q6VVB1 395 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 RAPH1Q70E73 1250 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ARMC9Q7Z3E5 817 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 SPATA2LQ8IUW3 424 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ARL10Q8N8L6 244 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 SPC24Q8NBT2 197 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 LNX1Q8TBB1 728 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 PROX1Q92786 737 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 RIT1Q92963 219 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 RTP4Q96DX8 246 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 HNRNPABQ99729 332 aaKnown RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 APOBEC3GQ9HC16 384 aaKnown RBP3.47□□□□□ -1.85
SCFD1-207ENST00000544052 TUFT1Q9NNX1 390 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 OLFML3Q9NRN5 406 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 ABCB8Q9NUT2 735 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 TXNDC16Q9P2K2 825 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 POU2F3Q9UKI9 436 aa3.47□□□□□ -1.85
SCFD1-207ENST00000544052 TONSLQ96HA7 1378 aa3.46□□□□□ -1.85
SCFD1-207ENST00000544052 USP47Q96K76 1375 aa3.46□□□□□ -1.85
SCFD1-207ENST00000544052 NINLQ9Y2I6 1382 aa3.46□□□□□ -1.85
SCFD1-207ENST00000544052 TJP1Q07157 1748 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 N4BP2Q86UW6 1770 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SCN11AQ9UI33 1791 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 ASPDHA6ND91 283 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 YDJCA8MPS7 323 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SLC30A4O14863 429 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SLC28A2O43868 658 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 OAZ2O95190 189 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 PPP1R3DO95685 299 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 ANKRD34CP0C6C1 535 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SPP1P10451 314 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 EEF2P13639 858 aaKnown RBP3.46□□□□□ -1.86
SCFD1-207ENST00000544052 EPCAMP16422 314 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SP100P23497 879 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-207ENST00000544052 NKX2-1P43699 371 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-207ENST00000544052 ZNF132P52740 706 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 UBXN1Q04323 297 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SLC15A2Q16348 729 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 UGT3A2Q3SY77 523 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SLC39A12Q504Y0 691 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SIRPB2Q5JXA9 342 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 C11orf63Q6NUN7 778 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 TMEM270Q6UE05 265 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.46□□□□□ -1.864e-10■■■■□ 25.5
SCFD1-207ENST00000544052 KCTD8Q6ZWB6 473 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 GPALPP1Q8IXQ4 340 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 MMD2Q8IY49 270 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 KBTBD3Q8NAB2 608 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 OR7G3Q8NG95 312 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SORCS1Q8WY21 1168 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 PIGBQ92521 554 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SMG7Q92540 1137 aaKnown RBP3.46□□□□□ -1.86
SCFD1-207ENST00000544052 CABS1Q96KC9 395 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 FAM71F1Q96KD3 344 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-207ENST00000544052 MYADMQ96S97 322 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 CCDC3Q9BQI4 270 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 ZPBPQ9BS86 351 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 PRRG4Q9BZD6 226 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 SNX25Q9H3E2 840 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 DBNDD1Q9H9R9 158 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 EBF2Q9HAK2 575 aa3.46□□□□□ -1.86
SCFD1-207ENST00000544052 ZNF701Q9NV72 531 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-207ENST00000544052 ZNF831Q5JPB2 1677 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms