RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.47■■□□□ 1.03
CDKN3-207ENST00000543789 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.47■■□□□ 1.03
CDKN3-207ENST00000543789 ABHD17BQ5VST6 288 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 MRNIPQ6NTE8 343 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 MRGPRGQ86SM5 289 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 PAQR7Q86WK9 346 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 RERGQ96A58 199 aaPredicted RBP21.47■■□□□ 1.03
CDKN3-207ENST00000543789 FAM136AQ96C01 138 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 OR2A5Q96R48 311 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 EIF2B3Q9NR50 452 aaKnown RBP21.47■■□□□ 1.03
CDKN3-207ENST00000543789 STMN3Q9NZ72 180 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 SVILO95425 2214 aa21.47■■□□□ 1.03
CDKN3-207ENST00000543789 IGKV1-8A0A0C4DH67 115 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 ARHGEF33A8MVX0 844 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 CCL21O00585 134 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 TXNDC9O14530 226 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 PFDN6O15212 129 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 NIPSNAP2O75323 286 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 VAPBO95292 243 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 CHRM3P20309 590 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 HSD17B2P37059 387 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 PRDX1Q06830 199 aaKnown RBP21.46■■□□□ 1.03
CDKN3-207ENST00000543789 TSTA3Q13630 321 aaPredicted RBP21.46■■□□□ 1.03
CDKN3-207ENST00000543789 PCOLCEQ15113 449 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 HIBCHQ6NVY1 386 aaPredicted RBP21.46■■□□□ 1.03
CDKN3-207ENST00000543789 MTFR2Q6P444 385 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 TMEM205Q6UW68 189 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 CCDC120Q96HB5 630 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 DRC3Q9H069 523 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 SYNPO2LQ9H987 977 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 CHST11Q9NPF2 352 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 MKL2Q9ULH7 1088 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 DRG1Q9Y295 367 aaKnown RBP21.46■■□□□ 1.03
CDKN3-207ENST00000543789 ZGRF1Q86YA3 2104 aa21.46■■□□□ 1.03
CDKN3-207ENST00000543789 A0A0A6YYC8 382 aaPredicted RBP21.45■■□□□ 1.02
CDKN3-207ENST00000543789 OR5H15A6NDH6 313 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 I3L1I5 382 aaPredicted RBP21.45■■□□□ 1.02
CDKN3-207ENST00000543789 MYO1CO00159 1063 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 FOXS1O43638 330 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 PRAMEF2O60811 474 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 CCNDBP1O95273 360 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 ESR1P03372 595 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 ARNTP27540 789 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 CA7P43166 264 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 RELAQ04206 551 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 SRSF11Q05519 484 aaKnown RBP21.45■■□□□ 1.02
CDKN3-207ENST00000543789 ACSBG2Q5FVE4 666 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 RNF187Q5TA31 235 aaPredicted RBP21.45■■□□□ 1.02
CDKN3-207ENST00000543789 ICE2Q659A1 982 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 ZNF425Q6IV72 752 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 ARHGEF39Q8N4T4 335 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 ZNF808Q8N4W9 903 aaPredicted RBP21.45■■□□□ 1.02
CDKN3-207ENST00000543789 LPGAT1Q92604 370 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 MFSD3Q96ES6 412 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 IMMP1LQ96LU5 166 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 TCF12Q99081 682 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 PKP4Q99569 1192 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 TUBB6Q9BUF5 446 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 KIFC1Q9BW19 673 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 FAM114A2Q9NRY5 505 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 TAC3Q9UHF0 121 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 TEKT2Q9UIF3 430 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 CRYL1Q9Y2S2 319 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 CAPN6Q9Y6Q1 641 aa21.45■■□□□ 1.02
CDKN3-207ENST00000543789 ZNF839A8K0R7 811 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 GOLGA8KD6RF30 607 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 GOLGA8TH3BQL2 631 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 PSIP1O75475 530 aaKnown RBP21.44■■□□□ 1.02
CDKN3-207ENST00000543789 EZRP15311 586 aaKnown RBP21.44■■□□□ 1.02
CDKN3-207ENST00000543789 HTR1EP28566 365 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 PNLIPRP1P54315 467 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 ADARP55265 1226 aaKnown RBP21.44■■□□□ 1.02
CDKN3-207ENST00000543789 RBPJQ06330 500 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 FAM53BQ14153 422 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 SYT16Q17RD7 645 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 ZNF630Q2M218 657 aaPredicted RBP21.44■■□□□ 1.02
CDKN3-207ENST00000543789 TYSND1Q2T9J0 566 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 KLHL38Q2WGJ6 581 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 CES3Q6UWW8 571 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 RPTNQ6XPR3 784 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 BNC2Q6ZN30 1099 aaPredicted RBP21.44■■□□□ 1.02
CDKN3-207ENST00000543789 ZC3H7AQ8IWR0 971 aaKnown RBP21.44■■□□□ 1.02
CDKN3-207ENST00000543789 METTL21AQ8WXB1 218 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 DESI2Q9BSY9 194 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 GALPQ9UBC7 116 aa21.44■■□□□ 1.02
CDKN3-207ENST00000543789 CATP04040 527 aaKnown RBP21.43■■□□□ 1.02
CDKN3-207ENST00000543789 C8orf89P0DMQ9 161 aa21.43■■□□□ 1.02
CDKN3-207ENST00000543789 PTGER4P35408 488 aa21.43■■□□□ 1.02
CDKN3-207ENST00000543789 MAT1AQ00266 395 aaKnown RBP21.43■■□□□ 1.02
CDKN3-207ENST00000543789 ZNF33BQ06732 778 aa21.43■■□□□ 1.02
CDKN3-207ENST00000543789 NDUFA9Q16795 377 aa21.43■■□□□ 1.02
CDKN3-207ENST00000543789 LONRF1Q17RB8 773 aa21.43■■□□□ 1.02
CDKN3-207ENST00000543789 ZXDCQ2QGD7 858 aaPredicted RBP21.43■■□□□ 1.02
CDKN3-207ENST00000543789 C4orf22Q6V702 233 aa21.43■■□□□ 1.02
CDKN3-207ENST00000543789 RNF10Q8N5U6 811 aaKnown RBP21.43■■□□□ 1.02
CDKN3-207ENST00000543789 AMER2Q8N7J2 671 aa21.43■■□□□ 1.02
CDKN3-207ENST00000543789 PCYOX1Q9UHG3 505 aa21.43■■□□□ 1.02
CDKN3-207ENST00000543789 TEP1Q99973 2627 aaKnown RBP21.43■■□□□ 1.02
CDKN3-207ENST00000543789 A8MUI8 341 aa21.42■■□□□ 1.02
CDKN3-207ENST00000543789 MGAT1P26572 445 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms