RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 SNRNP40Q96DI7 357 aaKnown RBP14.89□□□□□ -0.03
VPS33A-206ENST00000542310 OR2A5Q96R48 311 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 GPR21Q99679 349 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 BARD1Q99728 777 aaKnown RBP14.89□□□□□ -0.03
VPS33A-206ENST00000542310 NAT9Q9BTE0 207 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 EPS8L2Q9H6S3 715 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 SNX12Q9UMY4 172 aa14.89□□□□□ -0.03
VPS33A-206ENST00000542310 RUVBL1Q9Y265 456 aaKnown RBP14.89□□□□□ -0.03
VPS33A-206ENST00000542310 MASP2O00187 686 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 ZSCAN12O43309 604 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 FDXRP22570 491 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 IMPA1P29218 277 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 MPP1Q00013 466 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 TSTA3Q13630 321 aaPredicted RBP14.88□□□□□ -0.03
VPS33A-206ENST00000542310 FAM53BQ14153 422 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 CRYMQ14894 314 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 PPP1R7Q15435 360 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 B3GNTL1Q67FW5 361 aaPredicted RBP14.88□□□□□ -0.03
VPS33A-206ENST00000542310 CYHR1Q6ZMK1 362 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 SHISA6Q6ZSJ9 500 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 PCGF5Q86SE9 256 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 GALNT7Q86SF2 657 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 CNTN4Q8IWV2 1026 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 CPNE9Q8IYJ1 553 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 DTWD1Q8N5C7 304 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 C2CD4AQ8NCU7 369 aaPredicted RBP14.88□□□□□ -0.03
VPS33A-206ENST00000542310 TGIF2Q9GZN2 237 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 DRC3Q9H069 523 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 PCBD2Q9H0N5 130 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 LRRC4CQ9HCJ2 640 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 MKKSQ9NPJ1 570 aaPredicted RBP14.88□□□□□ -0.03
VPS33A-206ENST00000542310 MAP10Q9P2G4 905 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 PCYOX1Q9UHG3 505 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 TRMT6Q9UJA5 497 aaKnown RBP14.88□□□□□ -0.03
VPS33A-206ENST00000542310 C3orf18Q9UK00 162 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 CNTRLQ7Z7A1 2325 aa14.88□□□□□ -0.03
VPS33A-206ENST00000542310 DNALI1O14645 258 aaPredicted RBP14.87□□□□□ -0.03
VPS33A-206ENST00000542310 ALOX12BO75342 701 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 DDAH2O95865 285 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 SYF2O95926 243 aaKnown RBP14.87□□□□□ -0.03
VPS33A-206ENST00000542310 C8GP07360 202 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 CYC1P08574 325 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 ANXA5P08758 320 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 SLC26A3P40879 764 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 TSFMP43897 325 aaKnown RBP14.87□□□□□ -0.03
VPS33A-206ENST00000542310 RGS4P49798 205 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 MRPL49Q13405 166 aaKnown RBP14.87□□□□□ -0.03
VPS33A-206ENST00000542310 NDUFA9Q16795 377 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 HKDC1Q2TB90 917 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 HSP90AA5PQ58FG0 334 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 SPANXN3Q5MJ09 141 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 ATG9BQ674R7 924 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 KIAA0408Q6ZU52 694 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 UBE2R2Q712K3 238 aaPredicted RBP14.87□□□□□ -0.03
VPS33A-206ENST00000542310 PIWIL4Q7Z3Z4 852 aaKnown RBP14.87□□□□□ -0.03
VPS33A-206ENST00000542310 CUZD1Q86UP6 607 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 PPFIBP2Q8ND30 876 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 SYNPO2LQ9H987 977 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 ZBTB20Q9HC78 741 aaPredicted RBP14.87□□□□□ -0.03
VPS33A-206ENST00000542310 CCDC177Q9NQR7 707 aaPredicted RBP14.87□□□□□ -0.03
VPS33A-206ENST00000542310 ASF1BQ9NVP2 202 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 TAS2R13Q9NYV9 303 aa14.87□□□□□ -0.03
VPS33A-206ENST00000542310 NOVA2Q9UNW9 492 aaKnown RBP14.87□□□□□ -0.03
VPS33A-206ENST00000542310 HAT1O14929 419 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 HAUS5O94927 633 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 F7P08709 466 aaPredicted RBP14.86□□□□□ -0.03
VPS33A-206ENST00000542310 COX6A1P12074 109 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 TCP1P17987 556 aaKnown RBP14.86□□□□□ -0.03
VPS33A-206ENST00000542310 CCND1P24385 295 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 RPS15AP62244 130 aaKnown RBP14.86□□□□□ -0.03
VPS33A-206ENST00000542310 TBPL1P62380 186 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 AP2B1P63010 937 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 MFAP5Q13361 173 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 NR6A1Q15406 480 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 THEMIS2Q5TEJ8 643 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 ISLR2Q6UXK2 745 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 ADCK2Q7Z695 626 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 AMER3Q8N944 861 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 THAP11Q96EK4 314 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 C19orf60Q96EN9 201 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 THOC3Q96J01 351 aaKnown RBP14.86□□□□□ -0.03
VPS33A-206ENST00000542310 CCDC138Q96M89 665 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 AGPAT4Q9NRZ5 378 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 IARS2Q9NSE4 1012 aaKnown RBP14.86□□□□□ -0.03
VPS33A-206ENST00000542310 TMEM184CQ9NVA4 438 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 STOX2Q9P2F5 926 aaPredicted RBP14.86□□□□□ -0.03
VPS33A-206ENST00000542310 TRPC4Q9UBN4 977 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 ASIC3Q9UHC3 531 aa14.86□□□□□ -0.03
VPS33A-206ENST00000542310 CORO1CQ9ULV4 474 aaPredicted RBP14.86□□□□□ -0.03
VPS33A-206ENST00000542310 COPG1Q9Y678 874 aaKnown RBP14.86□□□□□ -0.03
VPS33A-206ENST00000542310 KCNE1BA0A087WTH5 132 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 LOC102723996A0A087X1L8 192 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 NSG1A0A0A6YYJ2 146 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 IDSB3KWA1 339 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 SLC16A5O15375 505 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 P2RX6O15547 441 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 FOXS1O43638 330 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 SEMA7AO75326 666 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 CBX6O95503 412 aa14.85□□□□□ -0.03
VPS33A-206ENST00000542310 DHX9Q08211 1270 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms