RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 LANCL3Q6ZV70 420 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 NEK10Q6ZWH5 1172 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 GIMAP7Q8NHV1 300 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 MMABQ96EY8 250 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 MRFAP1L1Q96HT8 127 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 PKP4Q99569 1192 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 MRPS30Q9NP92 439 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 TAC3Q9UHF0 121 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 CRYL1Q9Y2S2 319 aa14.67□□□□□ -0.06
CLSTN3-213ENST00000541953 TRGV8A0A0C4DH27 118 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 DYTNA2CJ06 578 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 MYO1CO00159 1063 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 HAT1O14929 419 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 ZNHIT1O43257 154 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 NDUFS3O75489 264 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 VAPBO95292 243 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 BMP10O95393 424 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 CMPK1P30085 196 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 PPARGP37231 505 aaPredicted RBP14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 CCNFP41002 786 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 ADORA2A-AS1P86434 159 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 TYSND1Q2T9J0 566 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 FCRLBQ6BAA4 426 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 TTC23LQ6PF05 361 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 TMEM205Q6UW68 189 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 NCCRP1Q6ZVX7 275 aaPredicted RBP14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 SYCE1Q8N0S2 351 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 OTUD6BQ8N6M0 293 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 OR9A1PQ8NGU1 263 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 IMMP1LQ96LU5 166 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 NPAS2Q99743 824 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 MACROD1Q9BQ69 325 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 HES7Q9BYE0 225 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.66□□□□□ -0.067e-6■■■■□ 19.6
CLSTN3-213ENST00000541953 ZNF700Q9H0M5 742 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 RBSNQ9H1K0 784 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 ABCF3Q9NUQ8 709 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 PAK5Q9P286 719 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 PCYOX1Q9UHG3 505 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 MED16Q9Y2X0 877 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 SCN2AQ99250 2005 aa14.66□□□□□ -0.06
CLSTN3-213ENST00000541953 SCN3AQ9NY46 2000 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 C19orf84I3L1E1 186 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 MAN1A2O60476 641 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 PSIP1O75475 530 aaKnown RBP14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 SEC24DO94855 1032 aaPredicted RBP14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 HEXBP07686 556 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 TERF1P54274 439 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 CUL1Q13616 776 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 KLHL38Q2WGJ6 581 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 ICE2Q659A1 982 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 CENPUQ71F23 418 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 MRGPRGQ86SM5 289 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 LRRC6Q86X45 466 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 LRRC56Q8IYG6 542 aaPredicted RBP14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 MPP5Q8N3R9 675 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 CCDC89Q8N998 374 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 OR9A4Q8NGU2 314 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 GSDMBQ8TAX9 411 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 ZNF480Q8WV37 535 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 BAG1Q99933 345 aaPredicted RBP14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 TGIF2Q9GZN2 237 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 RIC8BQ9NVN3 520 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 ABI3Q9P2A4 366 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 MKL2Q9ULH7 1088 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 SH2B3Q9UQQ2 575 aa14.65□□□□□ -0.06
CLSTN3-213ENST00000541953 CCDC168Q8NDH2 2452 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 E7ENX8 843 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 CCL21O00585 134 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 AVILO75366 819 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 WFS1O76024 890 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 SLC16A8O95907 504 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 CXCR2P25025 360 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 RPA3P35244 121 aaPredicted RBP14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 CA7P43166 264 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 KCNJ1P48048 391 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 PNLIPRP1P54315 467 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 EMP3P54852 163 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 BASP1P80723 227 aaKnown RBP14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 TAP2Q03519 686 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 ZNF33BQ06732 778 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 KIF5AQ12840 1032 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 ART3Q13508 389 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 INAQ16352 499 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 SEL1L2Q5TEA6 688 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 VN1R4Q7Z5H5 301 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 SMPDL3AQ92484 453 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 VPS50Q96JG6 964 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 CCDC138Q96M89 665 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 FOPNLQ96NB1 174 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 SIGLEC12Q96PQ1 595 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 PHF12Q96QT6 1004 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 KIFC1Q9BW19 673 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 VN1R1Q9GZP7 353 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 DRC3Q9H069 523 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 TSPAN10Q9H1Z9 355 aaPredicted RBP14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 MKKSQ9NPJ1 570 aaPredicted RBP14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 EIF2B3Q9NR50 452 aaKnown RBP14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 C14orf105Q9NVL8 296 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 SEC14L3Q9UDX4 400 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms