RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 SLC35G4P0C7Q5 338 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 MPC1LP0DKB6 136 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 CD22P20273 847 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 HIST1H2ADP20671 130 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 CYP2A7P20853 494 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 AKT2P31751 481 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 SERPINB5P36952 375 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 ACTR1BP42025 376 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 CSNK1EP49674 416 aaKnown RBP7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 ACTR1AP61163 376 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 TBPL1P62380 186 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 LPAL2Q16609 132 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 CATSPEREQ5SY80 951 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 METRNLQ641Q3 311 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 AGTRAPQ6RW13 159 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 EPGNQ6UW88 154 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 CLNKQ7Z7G1 428 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 PDZD3Q86UT5 571 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 UBALD2Q8IYN6 164 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 GALNT11Q8NCW6 608 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 FAM13CQ8NE31 585 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 MCOLN3Q8TDD5 553 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 TFGQ92734 400 aaPredicted RBP7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 PMEPA1Q969W9 287 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 UTP4Q969X6 686 aaKnown RBP7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 CLDN23Q96B33 292 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 HIST1H2AHQ96KK5 128 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 WDR92Q96MX6 357 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 LRRC37BQ96QE4 947 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 NR1H4Q96RI1 486 aaPredicted RBP7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 FERD3LQ96RJ6 166 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 HIST1H2AJQ99878 128 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 H2AFJQ9BTM1 129 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 TUBB6Q9BUF5 446 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 C1orf50Q9BV19 199 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 MRPL18Q9H0U6 180 aaKnown RBP7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 SPNS1Q9H2V7 528 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 DNAJC28Q9NX36 388 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 DLGAP2Q9P1A6 1054 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 LNPEPQ9UIQ6 1025 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 HAO1Q9UJM8 370 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 KLHL20Q9Y2M5 609 aa7.48□□□□□ -1.21
AC005840.3-201ENST00000541888 CABIN1Q9Y6J0 2220 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 SCN3AQ9NY46 2000 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 A0A1W2PPC4 97 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 ARHGAP10A1A4S6 786 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 PABPN1LA6NDY0 278 aaKnown RBP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 STX16-NPEPL1H3BU86 382 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 STX16O14662 325 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 AZIN1O14977 448 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 KPNA5O15131 536 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 IGLV3-19P01714 112 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 CATP04040 527 aaKnown RBP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 PTDSS1P48651 473 aaKnown RBP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 SRP54P61011 504 aaKnown RBP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 HMGCS1Q01581 520 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 ASPHQ12797 758 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 EIF2B5Q13144 721 aaKnown RBP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 DDX39BQ13838 428 aaKnown RBP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 FZD2Q14332 565 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 ABRAXAS2Q15018 415 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 PCBP2Q15366 365 aaKnown RBP eCLIP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 KANK2Q63ZY3 851 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 SULT1C3Q6IMI6 304 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 GPRIN3Q6ZVF9 776 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 NRROSQ86YC3 692 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 SYNPOQ8N3V7 929 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 ZNF740Q8NDX6 193 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 OR9I1Q8NGQ6 314 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 NEIL2Q969S2 332 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 PPP1R14BQ96C90 147 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 C19orf60Q96EN9 201 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 LINC00615Q96LM1 132 aaPredicted RBP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 GBP5Q96PP8 586 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 OR2M4Q96R27 311 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 EPHX3Q9H6B9 360 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 EML4Q9HC35 981 aaKnown RBP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 TCF7L2Q9NQB0 619 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 SAR1AQ9NR31 198 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 KCNK4Q9NYG8 393 aa7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 NKX1-2Q9UD57 310 aaPredicted RBP7.47□□□□□ -1.21
AC005840.3-201ENST00000541888 ASXL3Q9C0F0 2248 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 LOC100653049A0A140TA62 436 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 FAM86C2PA6NEL3 165 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 PRAMEF26H0Y7S4 382 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 K7EPI3 171 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 QSOX1O00391 747 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 KRT34O76011 436 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 ESRRBO95718 433 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 ALDOCP09972 364 aaKnown RBP7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 T-ENOLP0DO92 83 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 MYF5P13349 255 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 ACPPP15309 386 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 ALOX15P16050 662 aaPredicted RBP7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 HALP42357 657 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 SLC6A12P48065 614 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 CCDC6Q16204 474 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 IL27RAQ6UWB1 636 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 MILR1Q7Z6M3 343 aa7.46□□□□□ -1.21
AC005840.3-201ENST00000541888 TMPRSS11BQ86T26 416 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms