RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 TMEM236Q5W0B7 351 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 ZDHHC20Q5W0Z9 365 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.07□□□□□ -0.16
GCFC2-211ENST00000541687 RNF175Q8N4F7 328 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 QRFPRQ96P65 431 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 YIPF4Q9BSR8 244 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 INPP5KQ9BT40 448 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 MTG2Q9H4K7 406 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 DEC1Q9P2X7 70 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 ERVK-18Q9QC07 812 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 MAPRE3Q9UPY8 281 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 LOXHD1Q8IVV2 1947 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 MROH6A6NGR9 719 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 BMP10O95393 424 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 PCCBP05166 539 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 MYF6P23409 242 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 ACRV1P26436 265 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 RPL3P39023 403 aaKnown RBP14.07□□□□□ -0.16
GCFC2-211ENST00000541687 TAB1Q15750 504 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 C9orf64Q5T6V5 341 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 RNF111Q6ZNA4 994 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 CLECL1Q8IZS7 167 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 METTL25Q8N6Q8 603 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 OR8D1Q8WZ84 308 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 ART5Q96L15 291 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 MAGEB10Q96LZ2 347 aaPredicted RBP14.07□□□□□ -0.16
GCFC2-211ENST00000541687 NAA50Q9GZZ1 169 aaKnown RBP14.07□□□□□ -0.16
GCFC2-211ENST00000541687 ZDHHC4Q9NPG8 344 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 AGPAT4Q9NRZ5 378 aa14.07□□□□□ -0.16
GCFC2-211ENST00000541687 OAS3Q9Y6K5 1087 aaKnown RBP14.07□□□□□ -0.16
GCFC2-211ENST00000541687 A0A1W2PRB8 838 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 IDH3BO43837 385 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 CD70P32970 193 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 PSMD8P48556 350 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 CLCN4P51793 760 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 TIGD6Q17RP2 521 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 EGLN2Q96KS0 407 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 PRRG3Q9BZD7 231 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 CERS4Q9HA82 394 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 FAM118AQ9NWS6 357 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 TUBA8Q9NY65 449 aaPredicted RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 WASH4PA8MWX3 477 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 OR1F1O43749 312 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 CLPXO76031 633 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 AGXTP21549 392 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 CXCR2P25025 360 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 HOXD9P28356 352 aaPredicted RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 PCSK6P29122 969 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 ZNF829Q3KNS6 432 aaPredicted RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 LY6G5CQ5SRR4 150 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 LRRC70Q7Z2Q7 622 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 C16orf62Q7Z3J2 963 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 FAM124AQ86V42 546 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 CHERPQ8IWX8 916 aaKnown RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 ZNF557Q8N988 423 aaPredicted RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 OR8J3Q8NGG0 315 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 ZNF671Q8TAW3 534 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 KAT2AQ92830 837 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 TUBB1Q9H4B7 451 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 ADAM30Q9UKF2 790 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 PLAGL1Q9UM63 463 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 OARD1Q9Y530 152 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 PCDHB14Q9Y5E9 798 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 FADS2P1A8MWK0 482 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 SERPINB7O75635 380 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 HLCSP50747 726 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 TXNL4AP83876 142 aaKnown RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 PTSQ03393 145 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 CYP4Z2PQ8N1L4 340 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 NETO1Q8TDF5 533 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 MAL2Q969L2 176 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 YTHDF1Q9BYJ9 559 aaKnown RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 SLC29A3Q9BZD2 475 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 MIR1-1HGQ9H1L0 117 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 MARCH7Q9H992 704 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 POLE4Q9NR33 117 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 PCDHGB3Q9Y5G1 929 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 CEPT1Q9Y6K0 416 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 DRGXA6NNA5 263 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 NPPAP01160 153 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 CDK4P11802 303 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 ZNF12P17014 697 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 MAGEA10P43363 369 aaPredicted RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 RPL34P49207 117 aaKnown RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 HNMTP50135 292 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 SGSHP51688 502 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 TPTEP56180 551 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 RPS3AP61247 264 aaKnown RBP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 SCARB2Q14108 478 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 DPY19L1Q2PZI1 675 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 NFKBIDQ8NI38 313 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 ITM2CQ9NQX7 267 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.06□□□□□ -0.16
GCFC2-211ENST00000541687 SLC9A8Q9Y2E8 581 aa14.06□□□□□ -0.16
GCFC2-211ENST00000541687 TSPAN6O43657 245 aa14.05□□□□□ -0.16
GCFC2-211ENST00000541687 TLL1O43897 1013 aa14.05□□□□□ -0.16
GCFC2-211ENST00000541687 UGT2B17O75795 530 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms