RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 OR5K3A6NET4 321 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 C5orf52A6NGY3 159 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 DUXAA6NLW8 204 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 CACNB4O00305 520 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 DVL1O14640 695 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 PTGESO14684 152 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 HSF2BPO75031 334 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 SEC22BO75396 215 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 LDLRP01130 860 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 CCDC192P0DO97 292 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 PCP11498 1178 aaKnown RBP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 EPORP19235 508 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 TYMPP19971 482 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 KIF5BP33176 963 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 FRKP42685 505 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 PDX1P52945 283 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 MTCP1P56278 107 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 UBASH3AP57075 661 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 HNRNPKP61978 463 aaKnown RBP eCLIP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 IL1RL1Q01638 556 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 SETMARQ53H47 684 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 HSP90AA5PQ58FG0 334 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 XKR9Q5GH70 373 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 TOR1AIP1Q5JTV8 583 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 LRRC38Q5VT99 294 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 ZNF704Q6ZNC4 412 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 MIER3Q7Z3K6 550 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 RNF113BQ8IZP6 322 aaKnown RBP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 RTL3Q8N8U3 475 aaKnown RBP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 CLEC18CQ8NCF0 446 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 DBF4BQ8NFT6 615 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 OR52I2Q8NH67 350 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 PROX1Q92786 737 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 DAZLQ92904 295 aaKnown RBP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 RIT1Q92963 219 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 AP2M1Q96CW1 435 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 OXNAD1Q96HP4 312 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-217ENST00000541578 SLC22A12Q96S37 553 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 CSF3RQ99062 836 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 SLC25A33Q9BSK2 321 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 KRT23Q9C075 422 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 ZNF350Q9GZX5 532 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 SRD5A3Q9H8P0 318 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 PCDH9Q9HC56 1237 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 GKN1Q9NS71 199 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 SPG21Q9NZD8 308 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 PADI3Q9ULW8 664 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 COL18A1P39060 1754 aa3.99□□□□□ -1.77
SNHG1-217ENST00000541578 SBF1O95248 1867 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 CCDC88AQ3V6T2 1871 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 LY75O60449 1722 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 ARFGEF1Q9Y6D6 1849 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 TNS2Q63HR2 1409 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 C10orf71Q711Q0 1435 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 CTDSPLO15194 276 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 TTI1O43156 1089 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 SELENOFO60613 162 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 KCNJ13O60928 360 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 FCGR3BO75015 233 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 RFPL2O75678 378 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 DDHD2O94830 711 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 SLC16A8O95907 504 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 STAG3L1P0CL83 205 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 IL10P22301 178 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 HPDP32754 393 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 ZNF131P52739 623 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 MLLT10P55197 1068 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 PTENP60484 403 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 SEC61A1P61619 476 aaKnown RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 MAP2K1Q02750 393 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 FOLH1Q04609 750 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 ILF2Q12905 390 aaKnown RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 VEZF1Q14119 521 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 LASP1Q14847 261 aaKnown RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 RPS6KA1Q15418 735 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 MCMDC2Q4G0Z9 681 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 DNAJC21Q5F1R6 531 aaKnown RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 ELFN2Q5R3F8 820 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 NDUFAF5Q5TEU4 345 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 FAM69BQ5VUD6 431 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 FAM109BQ6ICB4 259 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 RBM23Q86U06 439 aaKnown RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 ANKRD13CQ8N6S4 541 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 TEX9Q8N6V9 391 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 KIAA0895Q8NCT3 520 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 OR5R1Q8NH85 324 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 VANGL1Q8TAA9 524 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 OCC1Q8TAD7 63 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 TMEM255BQ8WV15 326 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 CFAP36Q96G28 342 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 C5orf30Q96GV9 206 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 CDKN2AIPNLQ96HQ2 116 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 SPATA33Q96N06 139 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 MIS12Q9H081 205 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 SLA2Q9H6Q3 261 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 TCP11L1Q9NUJ3 509 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 TDRKHQ9Y2W6 561 aaKnown RBP3.98□□□□□ -1.77
SNHG1-217ENST00000541578 PAPPAQ13219 1627 aa3.98□□□□□ -1.77
SNHG1-217ENST00000541578 EVC2Q86UK5 1308 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms