RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 FOXD2O60548 495 aaPredicted RBP8.98□□□□□ -0.97
DDX55-208ENST00000541259 WFS1O76024 890 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 HSPA4LO95757 839 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 RPLP0P05388 317 aaKnown RBP8.98□□□□□ -0.97
DDX55-208ENST00000541259 GNAZP19086 355 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 ACP1P24666 158 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 GRIA3P42263 894 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 PIK3CGP48736 1102 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 ACADVLP49748 655 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 CCNG1P51959 295 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 FOXA1P55317 472 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 OCRLQ01968 901 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 LCP2Q13094 533 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 PRKAA1Q13131 559 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 DOC2AQ14183 400 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 XKR6Q5GH73 641 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 FCRL6Q6DN72 434 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 LETMD1Q6P1Q0 360 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 NXPE4Q6UWF7 544 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 ZNF574Q6ZN55 896 aaPredicted RBP8.98□□□□□ -0.97
DDX55-208ENST00000541259 RGS9BPQ6ZS82 235 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 FAM47EQ6ZV65 393 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 GPRIN3Q6ZVF9 776 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 MILR1Q7Z6M3 343 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 TMPRSS11BQ86T26 416 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 CUZD1Q86UP6 607 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 C17orf64Q86WR6 236 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 ZNF740Q8NDX6 193 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 DEFB124Q8NES8 71 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 RAB3IL1Q8TBN0 382 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 AGR3Q8TD06 166 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 NAT6Q93015 286 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 ATP6V1E2Q96A05 226 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 PRAP1Q96NZ9 151 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 MAP3K3Q99759 626 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 NUDT22Q9BRQ3 303 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 HAUS8Q9BT25 410 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 DPH7Q9BTV6 452 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 NTMT1Q9BV86 223 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 CAPS2Q9BXY5 557 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 PCBD2Q9H0N5 130 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 LRRN3Q9H3W5 708 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 CCDC134Q9H6E4 229 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 MRPS30Q9NP92 439 aaKnown RBP8.98□□□□□ -0.97
DDX55-208ENST00000541259 PNPOQ9NVS9 261 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 THAP1Q9NVV9 213 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 GPRC5BQ9NZH0 403 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 KLHL3Q9UH77 587 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 ZDHHC2Q9UIJ5 367 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 POMT2Q9UKY4 750 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 TIMM22Q9Y584 194 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 ENTPD2Q9Y5L3 495 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 KCNE2Q9Y6J6 123 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 DMXL1Q9Y485 3027 aa8.98□□□□□ -0.97
DDX55-208ENST00000541259 KNTC1P50748 2209 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 PTPRBP23467 1997 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 IGHV5-51A0A0C4DH38 117 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 A0A0J9YY10 115 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 FEZF1A0PJY2 475 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 SLC9B1P1A6NJY1 282 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 A8MU76 341 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 TNFSF14O43557 240 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 DUX1O43812 170 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 GFRA3O60609 400 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 MLYCDO95822 493 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 EBLN1P0CF75 366 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 C1GALT1C1LP0DN25 315 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 ST6GAL1P15907 406 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 MAGP20916 626 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 SERPINB3P29508 390 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 CMPK1P30085 196 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 SERPINB5P36952 375 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 ARL1P40616 181 aaPredicted RBP8.97□□□□□ -0.97
DDX55-208ENST00000541259 CASP2P42575 452 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 NAA20P61599 178 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 GNGT1P63211 74 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 CSNK1G2P78368 415 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 GPLD1P80108 840 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 IRF8Q02556 426 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 PCDH1Q08174 1060 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 SQSTM1Q13501 440 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 ZIC1Q15915 447 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 CPSF6Q16630 551 aaKnown RBP eCLIP8.97□□□□□ -0.97
DDX55-208ENST00000541259 SLC5A12Q1EHB4 618 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 CCDC157Q569K6 752 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 TCHHL1Q5QJ38 904 aaPredicted RBP8.97□□□□□ -0.97
DDX55-208ENST00000541259 SNAP47Q5SQN1 464 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 ATG9BQ674R7 924 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 CLEC6AQ6EIG7 209 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 KLHL35Q6PF15 583 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 FIGLAQ6QHK4 219 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 FAM129CQ86XR2 697 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 MYLK4Q86YV6 388 aaPredicted RBP8.97□□□□□ -0.97
DDX55-208ENST00000541259 PLD3Q8IV08 490 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 LRRC34Q8IZ02 419 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 ZNF781Q8N8C0 355 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 CDYL2Q8N8U2 506 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 L3MBTL4Q8NA19 623 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 ABHD11Q8NFV4 315 aa8.97□□□□□ -0.97
DDX55-208ENST00000541259 OR4K1Q8NGD4 311 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms