RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CCDC153Q494R4 210 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 MANEAQ5SRI9 462 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 ADCK2Q7Z695 626 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 PROSER1Q86XN7 944 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 PLD6Q8N2A8 252 aaKnown RBP18■□□□□ 0.47
VPS33A-205ENST00000541169 MYRIPQ8NFW9 859 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 CCDC126Q96EE4 140 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 ZNF285Q96NJ3 590 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 PRAP1Q96NZ9 151 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 OR4K3Q96R72 315 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 CTRCQ99895 268 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 EFHD1Q9BUP0 239 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 SPRY4Q9C004 299 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 SLC7A5P2Q9GIP4 190 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 STMN4Q9H169 189 aaPredicted RBP18■□□□□ 0.47
VPS33A-205ENST00000541169 APMAPQ9HDC9 416 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 OPTCQ9UBM4 332 aa18■□□□□ 0.47
VPS33A-205ENST00000541169 IGKV1-8A0A0C4DH67 115 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 UBXN8O00124 270 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 AGRPO00253 132 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 ZSCAN9O15535 394 aaPredicted RBP17.99■□□□□ 0.47
VPS33A-205ENST00000541169 STK17BO94768 372 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 KLK3P07288 261 aaPredicted RBP17.99■□□□□ 0.47
VPS33A-205ENST00000541169 KRT4P19013 534 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 CRHR1P34998 444 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 PCBP2Q15366 365 aaKnown RBP eCLIP17.99■□□□□ 0.47
VPS33A-205ENST00000541169 BEND6Q5SZJ8 279 aaPredicted RBP17.99■□□□□ 0.47
VPS33A-205ENST00000541169 PWWP2BQ6NUJ5 590 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 LRRC69Q6ZNQ3 347 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 DTX1Q86Y01 620 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 NLGN4XQ8N0W4 816 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 TTC29Q8NA56 475 aaPredicted RBP17.99■□□□□ 0.47
VPS33A-205ENST00000541169 NLGN4YQ8NFZ3 816 aaPredicted RBP17.99■□□□□ 0.47
VPS33A-205ENST00000541169 TTLQ8NG68 377 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 OR1L3Q8NH93 324 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 OR2W6PQ8NHA6 318 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 RDH11Q8TC12 318 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 KCNE4Q8WWG9 221 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 EXT2Q93063 718 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 NEIL2Q969S2 332 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 C17orf62Q9BQA9 187 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 AIF1LQ9BQI0 150 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 NDC1Q9BTX1 674 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 MKS1Q9NXB0 559 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 FOXJ2Q9P0K8 574 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 XPR1Q9UBH6 696 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 MID2Q9UJV3 735 aa17.99■□□□□ 0.47
VPS33A-205ENST00000541169 SNRNP200O75643 2136 aaKnown RBP17.99■□□□□ 0.47
VPS33A-205ENST00000541169 TRBC2A0A5B9 178 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 FITM1A5D6W6 292 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 K7EPI3 171 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 COPEO14579 308 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 TAPBPO15533 448 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 CTSVO60911 334 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 CD63P08962 238 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 MYZAPP0CAP1 466 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 CDH1P12830 882 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 EPB42P16452 691 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 HPDP32754 393 aaPredicted RBP17.98■□□□□ 0.47
VPS33A-205ENST00000541169 HSPA7P48741 367 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 CSNK1G2P78368 415 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 NFKB2Q00653 900 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 ZNF844Q08AG5 666 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 LAPTM5Q13571 262 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 PFKFB4Q16877 469 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 KRT71Q3SY84 523 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 GARNL3Q5VVW2 1013 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 FBXO42Q6P3S6 717 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 NXPE4Q6UWF7 544 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 C6orf15Q6UXA7 325 aaPredicted RBP17.98■□□□□ 0.47
VPS33A-205ENST00000541169 SH2D5Q6ZV89 423 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 TRABD2AQ86V40 505 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 SLC22A9Q8IVM8 553 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 FAM20CQ8IXL6 584 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 KRT78Q8N1N4 520 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 PROKR1Q8TCW9 393 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 TMEM79Q9BSE2 394 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 EFCAB11Q9BUY7 163 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 IQCGQ9H095 443 aaKnown RBP17.98■□□□□ 0.47
VPS33A-205ENST00000541169 ACTR5Q9H9F9 607 aaPredicted RBP17.98■□□□□ 0.47
VPS33A-205ENST00000541169 IRAK4Q9NWZ3 460 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 CPSF2Q9P2I0 782 aaKnown RBP17.98■□□□□ 0.47
VPS33A-205ENST00000541169 PADI1Q9ULC6 663 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 KLHL20Q9Y2M5 609 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 ANGPTL3Q9Y5C1 460 aa17.98■□□□□ 0.47
VPS33A-205ENST00000541169 HEATR5BQ9P2D3 2071 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 A0A1W2PPM1 405 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 GOLGA6L10A6NI86 522 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 H3BMH7 237 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 RGS16O15492 202 aaPredicted RBP17.97■□□□□ 0.47
VPS33A-205ENST00000541169 CCNT2O60583 730 aaKnown RBP17.97■□□□□ 0.47
VPS33A-205ENST00000541169 UGDHO60701 494 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 KIAA0754O94854 1291 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 DLGAP3O95886 979 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 C1GALT1C1LP0DN25 315 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 AHRP35869 848 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 EIF2S3P41091 472 aaKnown RBP17.97■□□□□ 0.47
VPS33A-205ENST00000541169 UCNP55089 124 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 SLC18A2Q05940 514 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 ABHD18Q0P651 414 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms