RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ROPN1LQ96C74 230 aa11.82□□□□□ -0.52
AP003559.1-201ENST00000540906 DPY30Q9C005 99 aa11.82□□□□□ -0.52
AP003559.1-201ENST00000540906 CLMPQ9H6B4 373 aa11.82□□□□□ -0.52
AP003559.1-201ENST00000540906 DCLRE1BQ9H816 532 aa11.82□□□□□ -0.52
AP003559.1-201ENST00000540906 S100A14Q9HCY8 104 aa11.82□□□□□ -0.52
AP003559.1-201ENST00000540906 SLC6A13Q9NSD5 602 aa11.82□□□□□ -0.52
AP003559.1-201ENST00000540906 NDE1Q9NXR1 346 aa11.82□□□□□ -0.52
AP003559.1-201ENST00000540906 ABCD2Q9UBJ2 740 aa11.82□□□□□ -0.52
AP003559.1-201ENST00000540906 LEF1Q9UJU2 399 aaPredicted RBP11.82□□□□□ -0.52
AP003559.1-201ENST00000540906 IGHV1OR15-9A0A0B4J2B8 117 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 IGKV1-8A0A0C4DH67 115 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SAP18O00422 153 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 RASGRP1O95267 797 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 APBB3O95704 486 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 AKT2P31751 481 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 ZP2Q05996 745 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 GTDC1Q4AE62 458 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 CACHD1Q5VU97 1274 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SLC30A9Q6PML9 568 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 ARMCX6Q7L4S7 300 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 DHDDSQ86SQ9 333 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 MSRB3Q8IXL7 192 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 RIMKLAQ8IXN7 391 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SIX5Q8N196 739 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 MINDY1Q8N5J2 469 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 C1orf52Q8N6N3 182 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 OR52E1Q8NGJ3 308 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 WDR48Q8TAF3 677 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 FAM110BQ8TC76 370 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SLC26A7Q8TE54 656 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SETD7Q8WTS6 366 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 NECAB3Q96P71 396 aaPredicted RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SERPINI1Q99574 410 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 OR51B5Q9H339 312 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SYNPO2LQ9H987 977 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SPAG4Q9NPE6 437 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 DMRT3Q9NQL9 472 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 ZNF624Q9P2J8 865 aaPredicted RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 VPS29Q9UBQ0 182 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 PCDHGA11Q9Y5H2 935 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 FEZF1A0PJY2 475 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 AKAP10O43572 662 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 DFNA5O60443 496 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 BCAS2O75934 225 aaPredicted RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 TGFB1P01137 390 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 MTHFD1P11586 935 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 ANPEPP15144 967 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 CLDN8P56748 225 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 STARD6P59095 220 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SRP54P61011 504 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 PRKCQQ04759 706 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SFSWAPQ12872 951 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 EIF2B5Q13144 721 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 MAD2L1Q13257 205 aaPredicted RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 ARHGAP19Q14CB8 494 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 C6orf163Q5TEZ5 329 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 ABI3BPQ7Z7G0 1075 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 PLD3Q8IV08 490 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 HID1Q8IV36 788 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 DPP10Q8N608 796 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 ANKRD53Q8N9V6 530 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 BHLHE22Q8NFJ8 381 aaPredicted RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 CHTF18Q8WVB6 975 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 GTF2H4Q92759 462 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 STMN2Q93045 179 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 MAGEB10Q96LZ2 347 aaPredicted RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 PPM1MQ96MI6 270 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 TACO1Q9BSH4 297 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SORBS1Q9BX66 1292 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SPHK1Q9NYA1 384 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 SPATA7Q9P0W8 599 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 STX18Q9P2W9 335 aaKnown RBP11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 BTBD3Q9Y2F9 522 aa11.81□□□□□ -0.52
AP003559.1-201ENST00000540906 CROCCQ5TZA2 2017 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 HEATR5BQ9P2D3 2071 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 KLHL33A6NCF5 533 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 A6NCN8 305 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 YY2O15391 372 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 GBAP04062 536 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 RPN2P04844 631 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 ATP6V1B2P21281 511 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 CD6P30203 668 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 SOX11P35716 441 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 ACTR1BP42025 376 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 PTDSS1P48651 473 aaKnown RBP11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 CCR5P51681 352 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 ACTR1AP61163 376 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 FLOT2Q14254 428 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 CCDC6Q16204 474 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 ANKRD26P1Q6NSI1 321 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 DNAJC14Q6Y2X3 702 aaPredicted RBP11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 ANKRD46Q86W74 232 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 C17orf64Q86WR6 236 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 SLC13A3Q8WWT9 602 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 PATE1Q8WXA2 126 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 SMPDL3AQ92484 453 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 SLC6A18Q96N87 628 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 INPP5KQ9BT40 448 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms