RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 NT5C3BQ969T7 300 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 HCN4Q9Y3Q4 1203 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 MAGED1Q9Y5V3 778 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-203ENST00000540357 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-203ENST00000540357 COL4A1P02462 1669 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 HAS3O00219 553 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 SYN3O14994 580 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 DDNO94850 711 aaPredicted RBP12.66□□□□□ -0.38
DNMT1-203ENST00000540357 GDF5P43026 501 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 EMP3P54852 163 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 OR52L1Q8NGH7 329 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 LILRB4Q8NHJ6 448 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 NETO1Q8TDF5 533 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 PLD4Q96BZ4 506 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 ATOH8Q96SQ7 321 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 SMAD5Q99717 465 aaKnown RBP12.66□□□□□ -0.38
DNMT1-203ENST00000540357 MRPL9Q9BYD2 267 aaKnown RBP12.66□□□□□ -0.38
DNMT1-203ENST00000540357 ZNF224Q9NZL3 707 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 COMMD3Q9UBI1 195 aa12.66□□□□□ -0.38
DNMT1-203ENST00000540357 PRAMEF33A0A0G2JMD5 474 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 CLCA1A8K7I4 914 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 AGRPO00253 132 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 PRAMEF10O60809 474 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 GLUD1P00367 558 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 CD247P20963 164 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 MANFP55145 182 aaKnown RBP12.65□□□□□ -0.38
DNMT1-203ENST00000540357 CLDN8P56748 225 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 PLD1Q13393 1074 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 HEPACAMQ14CZ8 416 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 LACC1Q8IV20 430 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 VANGL1Q8TAA9 524 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-203ENST00000540357 RFKQ969G6 155 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 SUSD3Q96L08 255 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 KCNN2Q9H2S1 579 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 PLAC1Q9HBJ0 212 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 NPAP1Q9NZP6 1156 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 SPIN1Q9Y657 262 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-203ENST00000540357 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 PGRMC2O15173 223 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 JRKO75564 520 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 CDRT1O95170 752 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 LCKP06239 509 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 PTGS2P35354 604 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 PRKCDQ05655 676 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 MAD2L1BPQ15013 274 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-203ENST00000540357 AGAP6Q5VW22 663 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 LINGO4Q6UY18 593 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 SOCS4Q8WXH5 440 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 AGAP4Q96P64 663 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 POLR2J3Q9H1A7 115 aaKnown RBP12.65□□□□□ -0.38
DNMT1-203ENST00000540357 ACOT13Q9NPJ3 140 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 AKAP7Q9P0M2 348 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-203ENST00000540357 A8MV72 311 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-203ENST00000540357 GUCY1B2O75343 617 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 RPN2P04844 631 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 ARSAP15289 507 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 XKP51811 444 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 STX4Q12846 297 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 ZBTB6Q15916 424 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 ARHGAP12Q8IWW6 846 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 OR8H3Q8N146 312 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 MGLLQ99685 303 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 DOHHQ9BU89 302 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 ZBTB20Q9HC78 741 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-203ENST00000540357 KDELR3O43731 214 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 GPR32O75388 356 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 NME6O75414 186 aaPredicted RBP12.65□□□□□ -0.38
DNMT1-203ENST00000540357 TMEM44Q2T9K0 475 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 ALFQ53S48 1182 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 C11orf88Q6PI97 169 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 CXCL17Q6UXB2 119 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 HS3ST5Q8IZT8 346 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 OR6K2Q8NGY2 324 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 PROKR1Q8TCW9 393 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 CACNG4Q9UBN1 327 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 PCDHB14Q9Y5E9 798 aa12.65□□□□□ -0.38
DNMT1-203ENST00000540357 PPP6CO00743 305 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 UBFD1O14562 309 aaKnown RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 OR1I1O60431 355 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 VIPP01282 170 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 EFNA1P20827 205 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 CSTF2P33240 577 aaKnown RBP eCLIP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 NAE1Q13564 534 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 GANABQ14697 944 aaKnown RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 DSG4Q86SJ6 1040 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 GPR149Q86SP6 731 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 TTYH2Q9BSA4 534 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 TIGARQ9NQ88 270 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 TVP23BQ9NYZ1 205 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 VAPAQ9P0L0 249 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 EVLQ9UI08 416 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 PADI3Q9ULW8 664 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 MRPS7Q9Y2R9 242 aaKnown RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 FAM92AA1XBS5 289 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 LRG1P02750 347 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 HAPLN1P10915 354 aaPredicted RBP12.64□□□□□ -0.39
DNMT1-203ENST00000540357 FUT4P22083 530 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 PIK3CBP42338 1070 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 TGM3Q08188 693 aa12.64□□□□□ -0.39
DNMT1-203ENST00000540357 EIF4HQ15056 248 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms