RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PRG2P13727 222 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 EN2P19622 333 aaPredicted RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 PPIBP23284 216 aaKnown RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 ALDH3A2P51648 485 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 CCR4P51679 360 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 SLC14A2Q15849 920 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 MOGQ16653 247 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 C6orf136Q5SQH8 315 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 PSAPL1Q6NUJ1 521 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 ARMC6Q6NXE6 501 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 ERICH5Q6P6B1 374 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 GRASPQ7Z6J2 395 aaPredicted RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 OOSP2Q86WS3 158 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 GPR150Q8NGU9 434 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 FAM110BQ8TC76 370 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 SLC38A2Q96QD8 506 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 RIMKLBQ9ULI2 386 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 CLEC4EQ9ULY5 219 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 CORO2BQ9UQ03 480 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 CCL26Q9Y258 94 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 TBC1D3BA6NDS4 549 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 FADS2P1A8MWK0 482 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 OR1I1O60431 355 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 IFNW1P05000 195 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 BMP7P18075 431 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 FDXRP22570 491 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 RPS3AP61247 264 aaKnown RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 MTAPQ13126 283 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 IL18Q14116 193 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 FNDC3BQ53EP0 1204 aaKnown RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 Q6ZNB5 142 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 C16orf62Q7Z3J2 963 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 TMEM25Q86YD3 366 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 RAVER1Q8IY67 606 aaKnown RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 KDM1BQ8NB78 822 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 OR2AP1Q8NGE2 309 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 FIBINQ8TAL6 211 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 ADAMTS19Q8TE59 1207 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 EXOSC8Q96B26 276 aaKnown RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 CCM2LQ9NUG4 571 aaPredicted RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 PTBP2Q9UKA9 531 aaKnown RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 A0A1B0GW55 424 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 SMIM30A4D0T7 59 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 DENRO43583 198 aaKnown RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 SSNA1O43805 119 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 DUX4L2P0CJ85 424 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 DUX4L3P0CJ86 424 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 DUX4L4P0CJ87 422 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 DUX4L5P0CJ88 424 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 DUX4L6P0CJ89 424 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 DUX4L7P0CJ90 424 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 TCF3P15923 654 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 NTSP30990 170 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 RAB25P57735 213 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 CDKL1Q00532 357 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 NFKB2Q00653 900 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 PDCD4Q53EL6 469 aaKnown RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 GLB1L3Q8NCI6 653 aaPredicted RBP9.7□□□□□ -0.86
TRAF1-202ENST00000540010 C7orf57Q8NEG2 295 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 SHKBP1Q8TBC3 707 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 CSGALNACT1Q8TDX6 532 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 GPR78Q96P69 363 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 CERS4Q9HA82 394 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 DUX4Q9UBX2 424 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 STOML2Q9UJZ1 356 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 DNAJC15Q9Y5T4 150 aa9.7□□□□□ -0.86
TRAF1-202ENST00000540010 SAGE2PA6NJ88 616 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ADAMDEC1O15204 470 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 GRID2O43424 1007 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 DFNA5O60443 496 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 LILRB3O75022 631 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CLDN7O95471 211 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ELFN1P0C7U0 828 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 PRPS2P11908 318 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 EPCAMP16422 314 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 KCNA5P22460 613 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CAPZA2P47755 286 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ACVR1Q04771 509 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 PLA2G4EQ3MJ16 856 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 HSF5Q4G112 596 aaPredicted RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 MAVSQ7Z434 540 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 GALNT7Q86SF2 657 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TMC8Q8IU68 726 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 PIANPQ8IYJ0 282 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CPXM2Q8N436 756 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 LRRC17Q8N6Y2 441 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 OSBPL10Q9BXB5 764 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 POLR2J2Q9GZM3 115 aaKnown RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 SEMA3GQ9NS98 782 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 SLC22A14Q9Y267 594 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 WNT6Q9Y6F9 365 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 UPK3BL1B0FP48 263 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 UPK3BL2E5RIL1 263 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CREG1O75629 220 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 RPLP0P05388 317 aaKnown RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 JUNP05412 331 aaKnown RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 SBK3P0C264 359 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ENGP17813 658 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CTSOP43234 321 aaPredicted RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ARL4DP49703 201 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms