RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 GDF5P43026 501 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 CAPZBP47756 277 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 ARL4DP49703 201 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 RAP1GDS1P52306 607 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 PWP1Q13610 501 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 GPR18Q14330 331 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 SLBPQ14493 270 aaKnown RBP eCLIP11.36□□□□□ -0.59
VTN-202ENST00000539746 DNAL1Q4LDG9 190 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 TRIM61Q5EBN2 209 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 XKR7Q5GH72 579 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 COQ5Q5HYK3 327 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.36□□□□□ -0.59
VTN-202ENST00000539746 TMTC4Q5T4D3 741 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 MBOAT1Q6ZNC8 495 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 IKBIPQ70UQ0 350 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 R3HCC1LQ7Z5L2 792 aaKnown RBP11.36□□□□□ -0.59
VTN-202ENST00000539746 ZFAND4Q86XD8 727 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 MAML2Q8IZL2 1156 aaPredicted RBP11.36□□□□□ -0.59
VTN-202ENST00000539746 FRMD1Q8N878 549 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 CAMKVQ8NCB2 501 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 OR2L3Q8NG85 312 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 OR4E2Q8NGC2 313 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 OR4K1Q8NGD4 311 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 OR4C6Q8NH72 309 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 RFWD2Q8NHY2 731 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 RP9Q8TA86 221 aaKnown RBP11.36□□□□□ -0.59
VTN-202ENST00000539746 NAT14Q8WUY8 206 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 ERP27Q96DN0 273 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 RAB3IPQ96QF0 476 aaPredicted RBP11.36□□□□□ -0.59
VTN-202ENST00000539746 C20orf27Q9GZN8 174 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 ABCG4Q9H172 646 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 MMADHCQ9H3L0 296 aaPredicted RBP11.36□□□□□ -0.59
VTN-202ENST00000539746 CLK4Q9HAZ1 481 aaKnown RBP11.36□□□□□ -0.59
VTN-202ENST00000539746 FANCEQ9HB96 536 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 LRTM1Q9HBL6 345 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 C1GALT1Q9NS00 363 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 ATAD3AQ9NVI7 634 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 ZIM2Q9NZV7 527 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 ZNF624Q9P2J8 865 aaPredicted RBP11.36□□□□□ -0.59
VTN-202ENST00000539746 BCAP29Q9UHQ4 241 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 ADAM29Q9UKF5 820 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 ICKQ9UPZ9 632 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 CFAP20Q9Y6A4 193 aaKnown RBP11.36□□□□□ -0.59
VTN-202ENST00000539746 SPACA6W5XKT8 324 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 NUMA1Q14980 2115 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 PIKFYVEQ9Y2I7 2098 aa11.36□□□□□ -0.59
VTN-202ENST00000539746 KCNE1BA0A087WTH5 132 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 PSMD12O00232 456 aaPredicted RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 SDHDO14521 159 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 UBFD1O14562 309 aaKnown RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 FLRT2O43155 660 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 TNFSF14O43557 240 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 SEC22BO75396 215 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 PROS1P07225 676 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 PCNAP12004 261 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 EPHA3P29320 983 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 MPLP40238 635 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 GRK6P43250 576 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 KCNK10P57789 538 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 REEP5Q00765 189 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 DMWDQ09019 674 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 MAP7Q14244 749 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 GRB7Q14451 532 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 RBBP5Q15291 538 aaKnown RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 NDUFA9Q16795 377 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 AP5B1Q2VPB7 878 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 HLA-BQ31612 363 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 LSM12Q3MHD2 195 aaKnown RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 UGT3A2Q3SY77 523 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 CLEC6AQ6EIG7 209 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 SPESP1Q6UW49 350 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 MSANTD1Q6ZTZ1 278 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 LARP4Q71RC2 724 aaKnown RBP eCLIP11.35□□□□□ -0.59
VTN-202ENST00000539746 C17orf82Q86X59 251 aaPredicted RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 LRRC56Q8IYG6 542 aaPredicted RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 SAMD14Q8IZD0 417 aaPredicted RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 NAGSQ8N159 534 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 ARL14Q8N4G2 192 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 GPR156Q8NFN8 814 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 OR7G3Q8NG95 312 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 RSC1A1Q92681 617 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 N4BP2L2Q92802 583 aaPredicted RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 POP5Q969H6 163 aaKnown RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 TCTN2Q96GX1 697 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 CCDC3Q9BQI4 270 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 MRPL1Q9BYD6 325 aaKnown RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 SEMA6CQ9H3T2 930 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 GAREM1Q9H706 876 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 RMND5AQ9H871 391 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 KCNK13Q9HB14 408 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 CAPN10Q9HC96 672 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 GEMIN8Q9NWZ8 242 aaKnown RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 SIRT5Q9NXA8 310 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 ACTR10Q9NZ32 417 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 AKAP7Q9P0M2 348 aaPredicted RBP11.35□□□□□ -0.59
VTN-202ENST00000539746 TAGLN3Q9UI15 199 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 RNF11Q9Y3C5 154 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 SNX11Q9Y5W9 270 aa11.35□□□□□ -0.59
VTN-202ENST00000539746 BLACEA4D250 179 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms