RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 KLF16Q9BXK1 252 aaPredicted RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 REXO4Q9GZR2 422 aaKnown RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 TMEM161AQ9NX61 479 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 THUMPD1Q9NXG2 353 aaKnown RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 VPS51Q9UID3 782 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 PSORS1C1Q9UIG5 152 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ZNF229Q9UJW7 825 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 STOML2Q9UJZ1 356 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ERVK-11Q9UQG0 969 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 PCDHGB3Q9Y5G1 929 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 PCDHGA6Q9Y5G7 932 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 AP1M2Q9Y6Q5 423 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 AGAP5A6NIR3 686 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 MAGEB17A8MXT2 336 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 SCAMP3O14828 347 aaKnown RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 PARNO95453 639 aaKnown RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 CTGFP29279 349 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 SPAM1P38567 509 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 NSG1P42857 185 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 CTSKP43235 329 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 SLC6A12P48065 614 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 PXNP49023 591 aaPredicted RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 TUFMP49411 452 aaKnown RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 FPGSQ05932 587 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ELAVL2Q12926 359 aaKnown RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 CAMK2GQ13555 558 aaPredicted RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 TBCEQ15813 527 aaPredicted RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 ZNF621Q6ZSS3 439 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 USP43Q70EL4 1123 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 GALNT10Q86SR1 603 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 SLC22A15Q8IZD6 547 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 SYNPOQ8N3V7 929 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 OR8J2Q8NGG1 315 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 MYDGFQ969H8 173 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ERLEC1Q96DZ1 483 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ALG14Q96F25 216 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 MAGEB10Q96LZ2 347 aaPredicted RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 CTRCQ99895 268 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 COPS4Q9BT78 406 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 SPATA9Q9BWV2 254 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 SLC12A9Q9BXP2 914 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 ABCB10Q9NRK6 738 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 FKBP14Q9NWM8 211 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 FAM120CQ9NX05 1096 aaKnown RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 SLCO3A1Q9UIG8 710 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 RNF6Q9Y252 685 aa9.37□□□□□ -0.91
CDH13-204ENST00000539548 NUP214P35658 2090 aaPredicted RBP9.37□□□□□ -0.91
CDH13-204ENST00000539548 MANSC4A6NHS7 340 aaPredicted RBP9.36□□□□□ -0.91
CDH13-204ENST00000539548 TBL1XO60907 577 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 C8GP07360 202 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 IRF1P10914 325 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 HMGA1P17096 107 aaKnown RBP9.36□□□□□ -0.91
CDH13-204ENST00000539548 AOAHP28039 575 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 GSSP48637 474 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 CSNK1DP48730 415 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 SLC11A1P49279 550 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 HNMTP50135 292 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 TPTEP56180 551 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 C21orf58P58505 322 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 ZNF45Q02386 682 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 ZNF33BQ06732 778 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 BCL2L1Q07817 233 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 UGT8Q16880 541 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 SYT16Q17RD7 645 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 FRG2Q64ET8 278 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 PDE12Q6L8Q7 609 aaKnown RBP9.36□□□□□ -0.91
CDH13-204ENST00000539548 PNCKQ6P2M8 343 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 UBE2R2Q712K3 238 aaPredicted RBP9.36□□□□□ -0.91
CDH13-204ENST00000539548 P3H2Q8IVL5 708 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 FRG2BQ96QU4 278 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 RAD9AQ99638 391 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 CEP44Q9C0F1 390 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 RNF38Q9H0F5 515 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 ZDHHC3Q9NYG2 299 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 TRPM5Q9NZQ8 1165 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 ATP11BQ9Y2G3 1177 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 TSC22D4Q9Y3Q8 395 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 PCDHB11Q9Y5F2 797 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 PLXNB3Q9ULL4 1909 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 K7ERQ8 282 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 NBNO60934 754 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 OXSR1O95747 527 aaPredicted RBP9.36□□□□□ -0.91
CDH13-204ENST00000539548 CDK1P06493 297 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 GADD45AP24522 165 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 CST5P28325 142 aaPredicted RBP9.36□□□□□ -0.91
CDH13-204ENST00000539548 CCR7P32248 378 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 GGT2P36268 569 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 KCNJ10P78508 379 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 PRKCDQ05655 676 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 SLC13A2Q13183 592 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 TIGD6Q17RP2 521 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 PRSS36Q5K4E3 855 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 COLEC12Q5KU26 742 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 STEAP3Q658P3 488 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 PRSS55Q6UWB4 352 aaPredicted RBP9.36□□□□□ -0.91
CDH13-204ENST00000539548 TAS1R1Q7RTX1 841 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 SLC46A3Q7Z3Q1 461 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 SYT12Q8IV01 421 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 DNAJC22Q8N4W6 341 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 AMER2Q8N7J2 671 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms