RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PCSK6P29122 969 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 HNRNPA1L2Q32P51 320 aaKnown RBP17.32■□□□□ 0.36
GNE-204ENST00000539208 SPIN4Q56A73 249 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 C9orf64Q5T6V5 341 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 CPZQ66K79 652 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 CES5AQ6NT32 575 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 SLCO4C1Q6ZQN7 724 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 HERVK_113Q902F9 699 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 NXPE3Q969Y0 559 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 RSPRY1Q96DX4 576 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 WDR34Q96EX3 536 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 PHF12Q96QT6 1004 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 FAM118AQ9NWS6 357 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 EDDM13A0A1B0GTR0 161 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 MAGEB17A8MXT2 336 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 PRRT4C9JH25 899 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 EPN2O95208 641 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 ENGP17813 658 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 CALRP27797 417 aaKnown RBP17.32■□□□□ 0.36
GNE-204ENST00000539208 DCTP40126 519 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 IST1P53990 364 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 RAE1P78406 368 aaKnown RBP17.32■□□□□ 0.36
GNE-204ENST00000539208 DPTQ07507 201 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 SLC14A1Q13336 389 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 BIRC2Q13490 618 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 THAP5Q7Z6K1 395 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 HIPK1Q86Z02 1210 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 OR8D1Q8WZ84 308 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 REPS1Q96D71 796 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 HIC2Q96JB3 615 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 ZNF514Q96K75 400 aaPredicted RBP17.32■□□□□ 0.36
GNE-204ENST00000539208 LINC00615Q96LM1 132 aaPredicted RBP17.32■□□□□ 0.36
GNE-204ENST00000539208 WBP1LQ9NX94 342 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 SIRT5Q9NXA8 310 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 IFT80Q9P2H3 777 aaPredicted RBP17.32■□□□□ 0.36
GNE-204ENST00000539208 BTNL2Q9UIR0 455 aa17.32■□□□□ 0.36
GNE-204ENST00000539208 SCAMP2O15127 329 aaKnown RBP17.31■□□□□ 0.36
GNE-204ENST00000539208 KCNK5O95279 499 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 RB1P06400 928 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 VAC14Q08AM6 782 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 DDX39BQ13838 428 aaKnown RBP17.31■□□□□ 0.36
GNE-204ENST00000539208 RBBP5Q15291 538 aaKnown RBP17.31■□□□□ 0.36
GNE-204ENST00000539208 VMACQ2NL98 169 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 CAPN13Q6MZZ7 669 aaPredicted RBP17.31■□□□□ 0.36
GNE-204ENST00000539208 ZNF480Q8WV37 535 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 ARRDC3Q96B67 414 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 NUS1Q96E22 293 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 MBOAT4Q96T53 435 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 SPATA9Q9BWV2 254 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 SMURF2Q9HAU4 748 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 TIMMDC1Q9NPL8 285 aa17.31■□□□□ 0.36
GNE-204ENST00000539208 C17orf113A0A1B0GUU1 675 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 ETHE1O95571 254 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 LAPTM5Q13571 262 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 EIF4HQ15056 248 aaKnown RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 ZC3H12BQ5HYM0 836 aaKnown RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 RBM48Q5RL73 367 aaKnown RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 MED27Q6P2C8 311 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 GALNT18Q6P9A2 607 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 ZNF621Q6ZSS3 439 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 ZZZ3Q8IYH5 903 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 CHPFQ8IZ52 775 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 C8orf59Q8N0T1 100 aaPredicted RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 CPA6Q8N4T0 437 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 ZNF555Q8NEP9 628 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 HUS1BQ8NHY5 278 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 NEIL2Q969S2 332 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 TUBA1CQ9BQE3 449 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 DUSP26Q9BV47 211 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 PRKAG2Q9UGJ0 569 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 ERVK-11Q9UQG0 969 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 PCDHB11Q9Y5F2 797 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 FOXE1O00358 373 aaPredicted RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 NFATC1O95644 943 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 ANXA4P09525 319 aaPredicted RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 LAMP1P11279 417 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 PBLDP30039 288 aaPredicted RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 SHMT2P34897 504 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 METAP1P53582 386 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 LRRC74AQ0VAA2 488 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 RFX4Q33E94 735 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 FNDC3BQ53EP0 1204 aaKnown RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 ANXA8L1Q5VT79 327 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 PDE12Q6L8Q7 609 aaKnown RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 ZCCHC8Q6NZY4 707 aaKnown RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 SPESP1Q6UW49 350 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 CFAP206Q8IYR0 622 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 C1orf52Q8N6N3 182 aaKnown RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 VPS37AQ8NEZ2 397 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 COQ8BQ96D53 544 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 CNDP2Q96KP4 475 aaKnown RBP17.3■□□□□ 0.36
GNE-204ENST00000539208 SGPP1Q9BX95 441 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 EHD1Q9H4M9 534 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 TRIM39Q9HCM9 518 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 IL1RAPQ9NPH3 570 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 C3orf18Q9UK00 162 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 RPS6KA6Q9UK32 745 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 GPR34Q9UPC5 381 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 COQ6Q9Y2Z9 468 aa17.3■□□□□ 0.36
GNE-204ENST00000539208 GABRR3A8MPY1 467 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms