RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 A0A1W2PQ72 361 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 SRRM4A7MD48 611 aaKnown RBP3.71□□□□□ -1.82
CCDC7-209ENST00000539197 SURF4O15260 269 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 EPB41L2O43491 1005 aaKnown RBP3.71□□□□□ -1.82
CCDC7-209ENST00000539197 IGHV2-70P01814 119 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 ATP1B1P05026 303 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 PCP11498 1178 aaKnown RBP3.71□□□□□ -1.82
CCDC7-209ENST00000539197 ZNF19P17023 458 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 FAAH2Q6GMR7 532 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 CATSPER3Q86XQ3 398 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 POC5Q8NA72 575 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 OR52B6Q8NGF0 335 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 SSC4DQ8WTU2 575 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 PTPMT1Q8WUK0 201 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-209ENST00000539197 ZMYND12Q9H0C1 365 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 SUCLA2Q9P2R7 463 aaPredicted RBP3.71□□□□□ -1.82
CCDC7-209ENST00000539197 WDR83OSQ9Y284 106 aa3.71□□□□□ -1.82
CCDC7-209ENST00000539197 PTRH2Q9Y3E5 179 aaKnown RBP3.71□□□□□ -1.82
CCDC7-209ENST00000539197 IGHV3-38A0A0C4DH36 116 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 CCL24O00175 119 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 ECE2O60344 883 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 SH3BGRLO75368 114 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 PRDM1O75626 825 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 MBD4O95243 580 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 KRT6AP02538 564 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 THY1P04216 161 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 KRT6BP04259 564 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 MYOGP15173 224 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 KRT6CP48668 564 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 MAPK12P53778 367 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 NDUFAF2Q8N183 169 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 CSNK1G2-AS1Q8NCQ2 148 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 OR4D10Q8NGI6 311 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 AGAP11Q8TF27 550 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 NAP1L4Q99733 375 aaKnown RBP3.7□□□□□ -1.82
CCDC7-209ENST00000539197 MGME1Q9BQP7 344 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 MYNNQ9NPC7 610 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 SLC35C2Q9NQQ7 365 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 ZNF581Q9P0T4 197 aa3.7□□□□□ -1.82
CCDC7-209ENST00000539197 LOC102723996A0A087X1L8 192 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 VILLO15195 856 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 LY6G6DO95868 133 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 DANCRP0C864 163 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 MCMDC2Q4G0Z9 681 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 OR4K1Q8NGD4 311 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 CHURC1Q8WUH1 139 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 NLGN3Q9NZ94 848 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 PRDM4Q9UKN5 801 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 ELF5Q9UKW6 265 aaPredicted RBP3.69□□□□□ -1.82
CCDC7-209ENST00000539197 ABT1Q9ULW3 272 aaKnown RBP3.69□□□□□ -1.82
CCDC7-209ENST00000539197 IGSF1Q8N6C5 1336 aa3.69□□□□□ -1.82
CCDC7-209ENST00000539197 A0A1W2PQ09 198 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 NEMP2A6NFY4 417 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 FAM220BPB1ANY3 271 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 ALDH1B1P30837 517 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 PSMB10P40306 273 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 MATR3P43243 847 aaKnown RBP eCLIP3.68□□□□□ -1.82
CCDC7-209ENST00000539197 PRELPP51888 382 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 DCAF7P61962 342 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 ATAD3CQ5T2N8 411 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 CCDC30Q5VVM6 783 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 MCUQ8NE86 351 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-209ENST00000539197 LPGAT1Q92604 370 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 HDAC2Q92769 488 aaKnown RBP3.68□□□□□ -1.82
CCDC7-209ENST00000539197 ZHX3Q9H4I2 956 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 Q9H8V8 135 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 ABCD2Q9UBJ2 740 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 GON4LQ3T8J9 2241 aa3.68□□□□□ -1.82
CCDC7-209ENST00000539197 GPR75-ASB3A0A0A6YYF3 556 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 IGHV3-20A0A0C4DH32 117 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 AP3D1O14617 1153 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 IRF2P14316 349 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 VAMP7P51809 220 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 NDUFV3P56181 108 aaKnown RBP3.67□□□□□ -1.82
CCDC7-209ENST00000539197 DCDC1P59894 354 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 ERVK-16P61578 105 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 TRAP1Q12931 704 aaKnown RBP3.67□□□□□ -1.82
CCDC7-209ENST00000539197 DDX10Q13206 875 aaKnown RBP3.67□□□□□ -1.82
CCDC7-209ENST00000539197 RUNX3Q13761 415 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 VEZF1Q14119 521 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 KHDRBS2Q5VWX1 349 aaKnown RBP3.67□□□□□ -1.82
CCDC7-209ENST00000539197 GUF1Q8N442 669 aaKnown RBP3.67□□□□□ -1.82
CCDC7-209ENST00000539197 C4orf32Q8N8J7 132 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 SPPL2AQ8TCT8 520 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 MRAPQ8TCY5 172 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 MPP4Q96JB8 637 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 FAM71F1Q96KD3 344 aaPredicted RBP3.67□□□□□ -1.82
CCDC7-209ENST00000539197 SEPHS2Q99611 448 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 MAK16Q9BXY0 300 aaKnown RBP3.67□□□□□ -1.82
CCDC7-209ENST00000539197 YTHDF1Q9BYJ9 559 aaKnown RBP3.67□□□□□ -1.82
CCDC7-209ENST00000539197 IL17BQ9UHF5 180 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 IKZF3Q9UKT9 509 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 NTNG1Q9Y2I2 539 aa3.67□□□□□ -1.82
CCDC7-209ENST00000539197 H0Y9J4 135 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 SLC1A7O00341 560 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 AADACP22760 399 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 NRIP1P48552 1158 aa3.66□□□□□ -1.82
CCDC7-209ENST00000539197 ARF3P61204 181 aaPredicted RBP3.66□□□□□ -1.82
CCDC7-209ENST00000539197 ARF1P84077 181 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms