RNA–Protein interactions for RNA: ENST00000539010.5

PDE4C-204, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-204ENST00000539010 EDF1O60869 148 aaKnown RBP13.63□□□□□ -0.23
PDE4C-204ENST00000539010 OR4F21O95013 312 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 CHEK2O96017 543 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 C9P02748 559 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 UROSP10746 265 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 JUPP14923 745 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 HMOX2P30519 316 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 GRIA3P42263 894 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 C10orf62Q5T681 223 aaPredicted RBP13.63□□□□□ -0.23
PDE4C-204ENST00000539010 LETMD1Q6P1Q0 360 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 TMEM71Q6P5X7 295 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 FAM92BQ6ZTR7 304 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 USP53Q70EK8 1073 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 PIP4P1Q86T03 277 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 ZNF781Q8N8C0 355 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 DCBLD1Q8N8Z6 715 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 OR4K1Q8NGD4 311 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 PIWIL2Q8TC59 973 aaKnown RBP13.63□□□□□ -0.23
PDE4C-204ENST00000539010 METTL6Q8TCB7 284 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 NETO1Q8TDF5 533 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 GFM1Q96RP9 751 aaKnown RBP13.63□□□□□ -0.23
PDE4C-204ENST00000539010 PLCD4Q9BRC7 762 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 SYNDIG1Q9H7V2 258 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 SLC6A20Q9NP91 592 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 PFDN4Q9NQP4 134 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 CUEDC1Q9NWM3 386 aaPredicted RBP13.63□□□□□ -0.23
PDE4C-204ENST00000539010 ZDHHC2Q9UIJ5 367 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 SNX6Q9UNH7 406 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 SH2B3Q9UQQ2 575 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 RNF11Q9Y3C5 154 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 PCDHGA11Q9Y5H2 935 aa13.63□□□□□ -0.23
PDE4C-204ENST00000539010 MN1Q10571 1320 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 TOX3O15405 576 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 GFRA3O60609 400 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 RASSF9O75901 435 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 KRT6AP02538 564 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 KRT6BP04259 564 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 CAPN1P07384 714 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 MAGP20916 626 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 MPSTP25325 297 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 VARSP26640 1264 aaKnown RBP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 KRT6CP48668 564 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 ACADVLP49748 655 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 GFERP55789 205 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 PPP1CAP62136 330 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 CSNK1G2P78368 415 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 E2F1Q01094 437 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 SLBPQ14493 270 aaKnown RBP eCLIP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 CPSF6Q16630 551 aaKnown RBP eCLIP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 ZNF425Q6IV72 752 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 MED27Q6P2C8 311 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 FIGLAQ6QHK4 219 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 TRIM73Q86UV7 250 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 FAM129CQ86XR2 697 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 WDR75Q8IWA0 830 aaKnown RBP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 FAM20CQ8IXL6 584 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 CDYL2Q8N8U2 506 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 TTLQ8NG68 377 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 OR4D9Q8NGE8 314 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 AGR3Q8TD06 166 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 ZNF317Q96PQ6 595 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 MAP3K3Q99759 626 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 NSRP1Q9H0G5 558 aaKnown RBP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 ELOVL6Q9H5J4 265 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 NT5DC2Q9H857 520 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 GEMIN8Q9NWZ8 242 aaKnown RBP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 VTI1BQ9UEU0 232 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 ZNF225Q9UK10 706 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 PCDHGA1Q9Y5H4 931 aa13.62□□□□□ -0.23
PDE4C-204ENST00000539010 PTPRZ1P23471 2315 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-204ENST00000539010 IGKV1-8A0A0C4DH67 115 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 A0A1B0GTL3 188 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 A0A1W2PQM1 296 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 GMNCA6NCL1 334 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 SRRM3A6NNA2 597 aaPredicted RBP13.61□□□□□ -0.23
PDE4C-204ENST00000539010 H0YIV9 168 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 PRAMEF4O60810 478 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 CDK4P11802 303 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 CSF2RBP32927 897 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 YBX1P67809 324 aaKnown RBP13.61□□□□□ -0.23
PDE4C-204ENST00000539010 PHEXP78562 749 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 REEP5Q00765 189 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 RELAQ04206 551 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 IFT88Q13099 833 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 SPIDRQ14159 915 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 CACHD1Q5VU97 1274 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 PRAMEF9Q5VWM5 478 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 TMIGD1Q6UXZ0 262 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 ATG14Q6ZNE5 492 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 GLRX5Q86SX6 157 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 PAQR7Q86WK9 346 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 TRAPPC9Q96Q05 1148 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 NUDT22Q9BRQ3 303 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 PRM3Q9NNZ6 103 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 ADGRE2Q9UHX3 823 aa13.61□□□□□ -0.23
PDE4C-204ENST00000539010 KCNE1BA0A087WTH5 132 aa13.6□□□□□ -0.23
PDE4C-204ENST00000539010 TRBC2A0A5B9 178 aa13.6□□□□□ -0.23
PDE4C-204ENST00000539010 OR2A25A4D2G3 310 aa13.6□□□□□ -0.23
PDE4C-204ENST00000539010 NTN3O00634 580 aaPredicted RBP13.6□□□□□ -0.23
PDE4C-204ENST00000539010 ULK1O75385 1050 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms