RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 OR4F21O95013 312 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 ESRRBO95718 433 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 FGF4P08620 206 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 UGT2B7P16662 529 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 NOVA1P51513 510 aaKnown RBP16.59■□□□□ 0.25
CLN6-202ENST00000538696 INHBCP55103 352 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 ERVPABLB-1P60509 514 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 SQSTM1Q13501 440 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 TSTA3Q13630 321 aaPredicted RBP16.59■□□□□ 0.25
CLN6-202ENST00000538696 PTCHD3Q3KNS1 767 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 UGT3A2Q3SY77 523 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 LETMD1Q6P1Q0 360 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 USP53Q70EK8 1073 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 TMPRSS9Q7Z410 1059 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 KIRREL3Q8IZU9 778 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 DCBLD1Q8N8Z6 715 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 STON2Q8WXE9 905 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 NCSTNQ92542 709 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 PYCR2Q96C36 320 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 MED8Q96G25 268 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 CDK15Q96Q40 435 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 LRRC37BQ96QE4 947 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 OR2A14Q96R47 310 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 SGPP1Q9BX95 441 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 RAB33BQ9H082 229 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 ABCG4Q9H172 646 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 CCDC177Q9NQR7 707 aaPredicted RBP16.59■□□□□ 0.25
CLN6-202ENST00000538696 TMEM9Q9P0T7 183 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 POMT2Q9UKY4 750 aa16.59■□□□□ 0.25
CLN6-202ENST00000538696 TRPC5OSA6NMA1 111 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 C2orf74A8MZ97 194 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 ISM1B1AKI9 464 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 CAPN5O15484 640 aaPredicted RBP16.58■□□□□ 0.24
CLN6-202ENST00000538696 CRCPO75575 148 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 KIAA0754O94854 1291 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 DKK1O94907 266 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 WDR47O94967 919 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 FTH1P19P0C7X4 201 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 CEACAM1P13688 526 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 EPORP19235 508 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 EPHA3P29320 983 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 PKNOX1P55347 436 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 KIR2DS3Q14952 304 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 GALNTL6Q49A17 601 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 PRAMEF13Q5VWM6 474 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 CAPN13Q6MZZ7 669 aaPredicted RBP16.58■□□□□ 0.24
CLN6-202ENST00000538696 ARMC6Q6NXE6 501 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 IRGCQ6NXR0 463 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 METTL2BQ6P1Q9 378 aaKnown RBP16.58■□□□□ 0.24
CLN6-202ENST00000538696 SLCO6A1Q86UG4 719 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 TRIM73Q86UV7 250 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 SNX31Q8N9S9 440 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 TWIST2Q8WVJ9 160 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 RTKNQ9BST9 563 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 CCDC28BQ9BUN5 200 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 ZMYND15Q9H091 742 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 IPPKQ9H8X2 491 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 MEAF6Q9HAF1 191 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 TCF7L2Q9NQB0 619 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 EPHA6Q9UF33 1036 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 TAC3Q9UHF0 121 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 STK38LQ9Y2H1 464 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 TIMM22Q9Y584 194 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 ENTPD2Q9Y5L3 495 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 PTGDR2Q9Y5Y4 395 aa16.58■□□□□ 0.24
CLN6-202ENST00000538696 D6RAR5 112 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 E9PBE3 544 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 KLHL41O60662 606 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 CPNE6O95741 557 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 OTCP00480 354 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 C9P02748 559 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 HOXB3P14651 431 aaPredicted RBP16.57■□□□□ 0.24
CLN6-202ENST00000538696 LSSP48449 732 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 PIK3CGP48736 1102 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 CCNG1P51959 295 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 CLPPQ16740 277 aaPredicted RBP16.57■□□□□ 0.24
CLN6-202ENST00000538696 LSM12Q3MHD2 195 aaKnown RBP16.57■□□□□ 0.24
CLN6-202ENST00000538696 WDR74Q6RFH5 385 aaPredicted RBP16.57■□□□□ 0.24
CLN6-202ENST00000538696 SPESP1Q6UW49 350 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 ACAD11Q709F0 780 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 CLNKQ7Z7G1 428 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 THOC6Q86W42 341 aaKnown RBP16.57■□□□□ 0.24
CLN6-202ENST00000538696 FAM20CQ8IXL6 584 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 OR4F6Q8NGB9 312 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 OR2A1Q8NGT9 310 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 ATP6V1E2Q96A05 226 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 MAELQ96JY0 434 aaKnown RBP16.57■□□□□ 0.24
CLN6-202ENST00000538696 PPM1MQ96MI6 270 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 TGM7Q96PF1 710 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 OR4K3Q96R72 315 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 GFM1Q96RP9 751 aaKnown RBP16.57■□□□□ 0.24
CLN6-202ENST00000538696 ACAT2Q9BWD1 397 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 TUBB1Q9H4B7 451 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 DNAJC11Q9NVH1 559 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 INTS7Q9NVH2 962 aaKnown RBP16.57■□□□□ 0.24
CLN6-202ENST00000538696 ARMCX1Q9P291 453 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 SH2B3Q9UQQ2 575 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 BTRCQ9Y297 605 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 PCDHB11Q9Y5F2 797 aa16.57■□□□□ 0.24
CLN6-202ENST00000538696 DNAJC15Q9Y5T4 150 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms